RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 KIAA1522Q9P206 1035 aaPredicted RBP17.23■□□□□ 0.35
USP48-210ENST00000489108 SUSD2Q9UGT4 822 aa17.23■□□□□ 0.35
USP48-210ENST00000489108 PCOLCE2Q9UKZ9 415 aa17.23■□□□□ 0.35
USP48-210ENST00000489108 STARD13Q9Y3M8 1113 aa17.23■□□□□ 0.35
USP48-210ENST00000489108 HOXC11O43248 304 aaPredicted RBP17.22■□□□□ 0.35
USP48-210ENST00000489108 LDHAP00338 332 aaKnown RBP17.22■□□□□ 0.35
USP48-210ENST00000489108 TMEM191BP0C7N4 346 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 WARSP23381 471 aaKnown RBP17.22■□□□□ 0.35
USP48-210ENST00000489108 DDIT3P35638 169 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 CACNA2D1P54289 1103 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 GRIN1Q05586 938 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 MYO1EQ12965 1108 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 MDH1BQ5I0G3 518 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 SDE2Q6IQ49 451 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 HS2ST1Q7LGA3 356 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 TMPRSS7Q7RTY8 843 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 BBS7Q8IWZ6 715 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 CHPFQ8IZ52 775 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 RASSF8Q8NHQ8 419 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 LARP4BQ92615 738 aaKnown RBP17.22■□□□□ 0.35
USP48-210ENST00000489108 WBP2Q969T9 261 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 CRELD1Q96HD1 420 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 ACCSQ96QU6 501 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 PCIF1Q9H4Z3 704 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 MRPL44Q9H9J2 332 aaKnown RBP17.22■□□□□ 0.35
USP48-210ENST00000489108 SPHK2Q9NRA0 654 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 TMEM30AQ9NV96 361 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 CHORDC1Q9UHD1 332 aaPredicted RBP17.22■□□□□ 0.35
USP48-210ENST00000489108 EXOC7Q9UPT5 735 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 R3HCC1Q9Y3T6 440 aaKnown RBP17.22■□□□□ 0.35
USP48-210ENST00000489108 HELZ2Q9BYK8 2649 aaKnown RBP17.22■□□□□ 0.35
USP48-210ENST00000489108 SHROOM3Q8TF72 1996 aa17.22■□□□□ 0.35
USP48-210ENST00000489108 GOLGA4Q13439 2230 aaKnown RBP17.21■□□□□ 0.35
USP48-210ENST00000489108 COCHO43405 550 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 CYP4F3Q08477 520 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 WDR45BQ5MNZ6 344 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
USP48-210ENST00000489108 OR5B17Q8NGF7 314 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 MMS19Q96T76 1030 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 CBWD1Q9BRT8 395 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 ZDHHC5Q9C0B5 715 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 IL21RQ9HBE5 538 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 INTS13Q9NVM9 706 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 DKK4Q9UBT3 224 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 SH3BP1Q9Y3L3 701 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 NME7Q9Y5B8 376 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 RAD54BQ9Y620 910 aa17.21■□□□□ 0.35
USP48-210ENST00000489108 TRABD2BA6NFA1 517 aa17.2■□□□□ 0.34
USP48-210ENST00000489108 GARTP22102 1010 aa17.2■□□□□ 0.34
USP48-210ENST00000489108 YWHAQP27348 245 aa17.2■□□□□ 0.34
USP48-210ENST00000489108 GNL1P36915 607 aaPredicted RBP17.2■□□□□ 0.34
USP48-210ENST00000489108 GRAMD4Q6IC98 578 aa17.2■□□□□ 0.34
USP48-210ENST00000489108 FOXJ1Q92949 421 aa17.2■□□□□ 0.34
USP48-210ENST00000489108 ANKRD36BP1Q96IX9 119 aa17.2■□□□□ 0.34
USP48-210ENST00000489108 MRGPRX1Q96LB2 322 aa17.2■□□□□ 0.34
USP48-210ENST00000489108 MRPL45Q9BRJ2 306 aaKnown RBP17.2■□□□□ 0.34
USP48-210ENST00000489108 PTPRJQ12913 1337 aa17.2■□□□□ 0.34
USP48-210ENST00000489108 A0A1B0GTW7 788 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 PRRT4C9JH25 899 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 CLDN5O00501 218 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 PRB1P04280 392 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 ATXN1LP0C7T5 689 aaKnown RBP17.19■□□□□ 0.34
USP48-210ENST00000489108 HECTD3Q5T447 861 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 KIAA1324Q6UXG2 1013 aaKnown RBP17.19■□□□□ 0.34
USP48-210ENST00000489108 SYCP3Q8IZU3 236 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 NUP93Q8N1F7 819 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 DNASE2BQ8WZ79 361 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 FBXO32Q969P5 355 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 GABRG3Q99928 467 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 SNX25Q9H3E2 840 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 GAREM1Q9H706 876 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 CCSER2Q9H7U1 834 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 PRDM16Q9HAZ2 1276 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 DNAJC17Q9NVM6 304 aaKnown RBP17.19■□□□□ 0.34
USP48-210ENST00000489108 TOR4AQ9NXH8 423 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 CACNA2D2Q9NY47 1150 aa17.19■□□□□ 0.34
USP48-210ENST00000489108 WASH3PC4AMC7 463 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 GCNT3O95395 438 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 IRF1P10914 325 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 PTPN1P18031 435 aaKnown RBP17.18■□□□□ 0.34
USP48-210ENST00000489108 CD6P30203 668 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 LONP1P36776 959 aaKnown RBP17.18■□□□□ 0.34
USP48-210ENST00000489108 CASP5P51878 434 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 ZCCHC9Q8N567 271 aaKnown RBP17.18■□□□□ 0.34
USP48-210ENST00000489108 OR6B3Q8NGW1 331 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 RHBDD1Q8TEB9 315 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 B3GNT5Q9BYG0 378 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 MIR1-1HGQ9H1L0 117 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 DPEP3Q9H4B8 488 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 TM7SF3Q9NS93 570 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 SEL1LQ9UBV2 794 aa17.18■□□□□ 0.34
USP48-210ENST00000489108 ASH1LQ9NR48 2969 aaKnown RBP17.18■□□□□ 0.34
USP48-210ENST00000489108 GOLGA8CPA6NN73 597 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 MEI4A8MW99 385 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 CILPO75339 1184 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 DKK1O94907 266 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 TNNC2P02585 160 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 BNC1Q01954 994 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 C19orf57Q0VDD7 668 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms