RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 APOBEC3GQ9HC16 384 aaKnown RBP13.82□□□□□ -0.2
ATPAF2-207ENST00000488753 CYLDQ9NQC7 956 aa13.82□□□□□ -0.2
ATPAF2-207ENST00000488753 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
ATPAF2-207ENST00000488753 MMP17Q9ULZ9 603 aa13.82□□□□□ -0.2
ATPAF2-207ENST00000488753 SCML2Q9UQR0 700 aa13.82□□□□□ -0.2
ATPAF2-207ENST00000488753 SH3BP1Q9Y3L3 701 aa13.82□□□□□ -0.2
ATPAF2-207ENST00000488753 PCDHA5Q9Y5H7 936 aa13.82□□□□□ -0.2
ATPAF2-207ENST00000488753 SLC30A4O14863 429 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 HOXC11O43248 304 aaPredicted RBP13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 STX10O60499 249 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 TLR5O60602 858 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 CILPO75339 1184 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 APODP05090 189 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 DGKEP52429 567 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 GAD2Q05329 585 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 ORC1Q13415 861 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 ELF2Q15723 593 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 COBLL1Q53SF7 1204 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 KRT39Q6A163 491 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 KLHDC10Q6PID8 442 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 CLEC20AQ6ZU45 233 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 KBTBD6Q86V97 674 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 RASSF3Q86WH2 238 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 FMR1NBQ8N0W7 255 aaPredicted RBP13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 TSTD1Q8NFU3 115 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 CYFIP2Q96F07 1278 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 TWNKQ96RR1 684 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 CCSER2Q9H7U1 834 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 FAM49BQ9NUQ9 324 aa13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 POLR3BQ9NW08 1133 aaPredicted RBP13.81□□□□□ -0.2
ATPAF2-207ENST00000488753 HELZP42694 1942 aaKnown RBP13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 NCOR2Q9Y618 2525 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 HHLA1C9JL84 531 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 CETN3O15182 167 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 KAT7O95251 611 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 ZNF806P0C7X5 589 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 GRIA2P42262 883 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 TNFRSF4P43489 277 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 LIMK1P53667 647 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 GOLGA8FQ08AF8 430 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 GOLGA8DPQ0D2H9 430 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 CRY1Q16526 586 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 PLK5Q496M5 336 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 C2orf27AQ580R0 203 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 BTBD8Q5XKL5 378 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 ETFBKMTQ8IXQ9 262 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 FBXL13Q8NEE6 735 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 KCNV2Q8TDN2 545 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 WHAMMQ8TF30 809 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 CNOT6LQ96LI5 555 aaKnown RBP13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 GDPD2Q9HCC8 539 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 ARHGEF4Q9NR80 690 aa13.8□□□□□ -0.2
ATPAF2-207ENST00000488753 GOLGA6L4A6NEF3 574 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 ALDH1A2O94788 518 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 RHOBTB1O94844 696 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 EPB41P11171 864 aaKnown RBP13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 ADORA2BP29275 332 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 ATP5C1P36542 298 aaKnown RBP13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 KIR2DL1P43626 348 aaPredicted RBP13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 SLC6A11P48066 632 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 MXI1P50539 228 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 KIF11P52732 1056 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 SEC13P55735 322 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 BECN1Q14457 450 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 USP39Q53GS9 565 aaKnown RBP13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 PLA2G2CQ5R387 149 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 LY6G5CQ5SRR4 150 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 NUDT18Q6ZVK8 323 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 HTR3DQ70Z44 454 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 TADA2BQ86TJ2 420 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 C12orf40Q86WS4 652 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 BBS7Q8IWZ6 715 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 ZNF276Q8N554 614 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 C12orf50Q8NA57 414 aaPredicted RBP13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 SPATA20Q8TB22 786 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 DDX1Q92499 740 aaKnown RBP13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 ARRDC1-AS1Q9H2J1 176 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 SPHK2Q9NRA0 654 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 RAB20Q9NX57 234 aa13.79□□□□□ -0.2
ATPAF2-207ENST00000488753 SLC16A3O15427 465 aaKnown RBP13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 GREM1O60565 184 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 SMC2O95347 1197 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 CD58P19256 250 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 PGFP49763 221 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 PSEN1P49768 467 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 NUCB2P80303 420 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 FKBP3Q00688 224 aaKnown RBP13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 PNOCQ13519 176 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 EOGTQ5NDL2 527 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 GPRIN1Q7Z2K8 1008 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 CCDC186Q7Z3E2 898 aa13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 TRMT11Q7Z4G4 463 aaKnown RBP13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 ZC3H3Q8IXZ2 948 aaKnown RBP13.78□□□□□ -0.2
ATPAF2-207ENST00000488753 PHTF2Q8N3S3 785 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms