RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 TIE1P35590 1138 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 GNL1P36915 607 aaPredicted RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 SNRPFP62306 86 aaKnown RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 GAD2Q05329 585 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 E2F4Q16254 413 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 SNRNP35Q16560 246 aaKnown RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 PREPLQ4J6C6 727 aaPredicted RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 LY6G5CQ5SRR4 150 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 TRMT11Q7Z4G4 463 aaKnown RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 DEFB124Q8NES8 71 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 CEP76Q8TAP6 659 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 ZNF507Q8TCN5 953 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 RLN3Q8WXF3 142 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 MMS19Q96T76 1030 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 XYLT2Q9H1B5 865 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 SLC32A1Q9H598 525 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 CAPN10Q9HC96 672 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 AGPAT3Q9NRZ7 376 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 KBTBD4Q9NVX7 518 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 SMPD4Q9NXE4 827 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 MSRB2Q9Y3D2 182 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 STARD13Q9Y3M8 1113 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 UBE4BO95155 1302 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 NBEAQ8NFP9 2946 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 A0A1W2PQ27 194 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 A0A1W2PQ64 194 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 A0A1W2PQD8 194 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 TGFB1I1O43294 461 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 AP5Z1O43299 807 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 COCHO43405 550 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 MBL2P11226 248 aaPredicted RBP13.02□□□□□ -0.33
TTC3-221ENST00000488522 YWHAQP27348 245 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 ATICP31939 592 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 CYP24A1Q07973 514 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 EHHADHQ08426 723 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 RESP18Q5W5W9 173 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 SLC36A4Q6YBV0 504 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 CLEC17AQ6ZS10 378 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 RABEPKQ7Z6M1 372 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 C12orf56Q8IXR9 622 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 TMEFF1Q8IYR6 380 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 FRMD1Q8N878 549 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 TERB1Q8NA31 727 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 OR6B3Q8NGW1 331 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 B3GNT5Q9BYG0 378 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 TRIM9Q9C026 710 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 LRRC27Q9C0I9 530 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 CUEDC2Q9H467 287 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 DPEP3Q9H4B8 488 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 COMMD8Q9NX08 183 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.33
TTC3-221ENST00000488522 HCN2Q9UL51 889 aa13.02□□□□□ -0.33
TTC3-221ENST00000488522 LAMA5O15230 3695 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 TCRBV21S2A2A0A5A6 115 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 SRRM3A6NNA2 597 aaPredicted RBP13.01□□□□□ -0.33
TTC3-221ENST00000488522 GREM1O60565 184 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 TULP3O75386 442 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 SERPINF2P08697 491 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 ITPKAP23677 461 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 CMA1P23946 247 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 TNNC1P63316 161 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 DUOXA1Q1HG43 343 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 WDR72Q3MJ13 1102 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 EMC10Q5UCC4 262 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 HS2ST1Q7LGA3 356 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 FAM35AQ86V20 835 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
TTC3-221ENST00000488522 HMGB4Q8WW32 186 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 FBXO32Q969P5 355 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 BCCIPQ9P287 314 aaKnown RBP eCLIP13.01□□□□□ -0.33
TTC3-221ENST00000488522 SLC6A14Q9UN76 642 aa13.01□□□□□ -0.33
TTC3-221ENST00000488522 ATP8B3O60423 1300 aa13□□□□□ -0.33
TTC3-221ENST00000488522 A0A1W2PQF6 199 aa13□□□□□ -0.33
TTC3-221ENST00000488522 H0Y626 953 aa13□□□□□ -0.33
TTC3-221ENST00000488522 MAP3K13O43283 966 aa13□□□□□ -0.33
TTC3-221ENST00000488522 TRIM16O95361 564 aa13□□□□□ -0.33
TTC3-221ENST00000488522 CAPNS1P04632 268 aa13□□□□□ -0.33
TTC3-221ENST00000488522 GABRG2P18507 467 aa13□□□□□ -0.33
TTC3-221ENST00000488522 SLC5A3P53794 718 aa13□□□□□ -0.33
TTC3-221ENST00000488522 KDSRQ06136 332 aa13□□□□□ -0.33
TTC3-221ENST00000488522 HNRNPDQ14103 355 aaKnown RBP13□□□□□ -0.33
TTC3-221ENST00000488522 BMT2Q1RMZ1 405 aa13□□□□□ -0.33
TTC3-221ENST00000488522 UAP1L1Q3KQV9 507 aa13□□□□□ -0.33
TTC3-221ENST00000488522 HECTD3Q5T447 861 aa13□□□□□ -0.33
TTC3-221ENST00000488522 PAQR9Q6ZVX9 377 aa13□□□□□ -0.33
TTC3-221ENST00000488522 PDILTQ8N807 584 aa13□□□□□ -0.33
TTC3-221ENST00000488522 ZNF513Q8N8E2 541 aaPredicted RBP13□□□□□ -0.33
TTC3-221ENST00000488522 XXYLT1Q8NBI6 393 aa13□□□□□ -0.33
TTC3-221ENST00000488522 ZCCHC14Q8WYQ9 949 aaKnown RBP13□□□□□ -0.33
TTC3-221ENST00000488522 ZNF516Q92618 1163 aa13□□□□□ -0.33
TTC3-221ENST00000488522 HPS3Q969F9 1004 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms