RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 CDC25CP30307 473 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 SLC19A1P41440 591 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 NSFP46459 744 aaKnown RBP10.83□□□□□ -0.68
SKA1-204ENST00000488454 TKTL1P51854 596 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 KIF11P52732 1056 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 GOLGA8FQ08AF8 430 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 GOLGA8DPQ0D2H9 430 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 TAF10Q12962 218 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 PDCLQ13371 301 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 SMAD4Q13485 552 aaKnown RBP10.83□□□□□ -0.68
SKA1-204ENST00000488454 ARID5BQ14865 1188 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 ARHGAP15Q53QZ3 475 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 NAA35Q5VZE5 725 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 LIAT1Q6ZQX7 453 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 ZNF571Q7Z3V5 609 aaPredicted RBP10.83□□□□□ -0.68
SKA1-204ENST00000488454 RETREG3Q86VR2 466 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 ARHGAP18Q8N392 663 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 WDTC1Q8N5D0 677 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 SMRP1Q8NCR6 262 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
SKA1-204ENST00000488454 STKLD1Q8NE28 680 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 PDZD8Q8NEN9 1154 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 CPA5Q8WXQ8 436 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 GOLGA1Q92805 767 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 TRMT2BQ96GJ1 504 aaKnown RBP10.83□□□□□ -0.68
SKA1-204ENST00000488454 MYRFLQ96LU7 910 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 PANX2Q96RD6 677 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 ATXN3LQ9H3M9 355 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 WDR6Q9NNW5 1121 aaKnown RBP10.83□□□□□ -0.68
SKA1-204ENST00000488454 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 CNGB3Q9NQW8 809 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 HCFC1R1Q9NWW0 138 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 SCML2Q9UQR0 700 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 MRPS23Q9Y3D9 190 aaKnown RBP10.83□□□□□ -0.68
SKA1-204ENST00000488454 SZT2Q5T011 3432 aa10.83□□□□□ -0.68
SKA1-204ENST00000488454 TRANK1O15050 2925 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 PIK3R2O00459 728 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 SART1O43290 800 aaKnown RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 AKR1B10O60218 316 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 ZBED1O96006 694 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 CYP1A1P04798 512 aaPredicted RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 CDH5P33151 784 aaPredicted RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 EIF4A3P38919 411 aaKnown RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 NOMO3P69849 1222 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 NTHL1P78549 312 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 CDK17Q00537 523 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 ADIGQ0VDE8 80 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 CBX2Q14781 532 aaPredicted RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 CLEC16AQ2KHT3 1053 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 LEXMQ3ZCV2 418 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 RAB41Q5JT25 222 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 E4F1Q66K89 784 aaPredicted RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 HGSNATQ68CP4 663 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 ACAD10Q6JQN1 1059 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 GPRIN1Q7Z2K8 1008 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 TMEM110Q86TL2 294 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 MON1AQ86VX9 555 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 TC2NQ8N9U0 490 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 OVCA2Q8WZ82 227 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 MRPS31Q92665 395 aaKnown RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 C18orf8Q96DM3 657 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 PCDHB18PQ96TA0 734 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 TTLL2Q9BWV7 592 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 ULBP1Q9BZM6 244 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 AVENQ9NQS1 362 aaPredicted RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 TLR8Q9NR97 1041 aaKnown RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 IL37Q9NZH6 218 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 CHORDC1Q9UHD1 332 aaPredicted RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 ADAMTS1Q9UHI8 967 aa10.82□□□□□ -0.68
SKA1-204ENST00000488454 USP15Q9Y4E8 981 aaPredicted RBP10.82□□□□□ -0.68
SKA1-204ENST00000488454 SSU72P8A0A1W2PR75 194 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 A0A1W2PRU2 124 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 TMCO5BA8MYB1 307 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 E5RJQ4 531 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 MBTPS2O43462 519 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 NRDCO43847 1150 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 F11P03951 625 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 RALAP11233 206 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 GZMAP12544 262 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 UNGP13051 313 aaPredicted RBP10.81□□□□□ -0.68
SKA1-204ENST00000488454 EPHA5P54756 1037 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 PM20D1Q6GTS8 502 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 OR6B2Q6IFH4 312 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 PTCRAQ6ISU1 281 aaPredicted RBP10.81□□□□□ -0.68
SKA1-204ENST00000488454 WDR59Q6PJI9 974 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 CCDC186Q7Z3E2 898 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 TADA2BQ86TJ2 420 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 TMC8Q8IU68 726 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 ZDHHC17Q8IUH5 632 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 TMTC1Q8IUR5 882 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 SLC30A5Q8TAD4 765 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 IRGQQ8WZA9 623 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 CPXM1Q96SM3 734 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 CHP1Q99653 195 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 TRIM62Q9BVG3 475 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 LRRC3Q9BY71 257 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 NACA2Q9H009 215 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 SLITRK6Q9H5Y7 841 aa10.81□□□□□ -0.68
SKA1-204ENST00000488454 NHEJ1Q9H9Q4 299 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms