RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 NETO1Q8TDF5 533 aa23.89■■□□□ 1.41
PTPN4-211ENST00000488279 ZC3H10Q96K80 434 aaKnown RBP23.89■■□□□ 1.41
PTPN4-211ENST00000488279 TWNKQ96RR1 684 aa23.89■■□□□ 1.41
PTPN4-211ENST00000488279 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.88■■□□□ 1.41
PTPN4-211ENST00000488279 CETN3O15182 167 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 TLR5O60602 858 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 ADH5P11766 374 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 MCCD1P59942 119 aaPredicted RBP23.88■■□□□ 1.41
PTPN4-211ENST00000488279 MRPS21P82921 87 aaKnown RBP23.88■■□□□ 1.41
PTPN4-211ENST00000488279 GAD2Q05329 585 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 PNOCQ13519 176 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 BECN1Q14457 450 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 LY6G5CQ5SRR4 150 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 CLEC20AQ6ZU45 233 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 TSTD1Q8NFU3 115 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 EEF2KMTQ96G04 330 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 DUSP9Q99956 384 aaKnown RBP23.88■■□□□ 1.41
PTPN4-211ENST00000488279 ARRDC1-AS1Q9H2J1 176 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 SCML2Q9UQR0 700 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 ATG2BQ96BY7 2078 aa23.88■■□□□ 1.41
PTPN4-211ENST00000488279 A0A0A0MRY4 1105 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.87■■□□□ 1.41
PTPN4-211ENST00000488279 STX10O60499 249 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 CILPO75339 1184 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 KAT7O95251 611 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 APODP05090 189 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 EPB41P11171 864 aaKnown RBP23.87■■□□□ 1.41
PTPN4-211ENST00000488279 PGFP49763 221 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 FMR1NBQ8N0W7 255 aaPredicted RBP23.87■■□□□ 1.41
PTPN4-211ENST00000488279 FAXDC2Q96IV6 333 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 PNPLA8Q9NP80 782 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 ARHGEF4Q9NR80 690 aa23.87■■□□□ 1.41
PTPN4-211ENST00000488279 ACO1P21399 889 aaKnown RBP23.86■■□□□ 1.41
PTPN4-211ENST00000488279 GRIA2P42262 883 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 DGKEP52429 567 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 BTBD8Q5XKL5 378 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 BBS7Q8IWZ6 715 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 TTC39CQ8N584 583 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 CCDC33Q8N5R6 958 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 WHAMMQ8TF30 809 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 JAKMIP2Q96AA8 810 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 MMP17Q9ULZ9 603 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 PCDHA5Q9Y5H7 936 aa23.86■■□□□ 1.41
PTPN4-211ENST00000488279 HELZP42694 1942 aaKnown RBP23.86■■□□□ 1.41
PTPN4-211ENST00000488279 DCDC2BA2VCK2 349 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 HHLA1C9JL84 531 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 EPN2O95208 641 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 TBX18O95935 607 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 ZNF806P0C7X5 589 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 IRF1P10914 325 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 ATP5C1P36542 298 aaKnown RBP23.85■■□□□ 1.41
PTPN4-211ENST00000488279 PRCPP42785 496 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 TNFRSF4P43489 277 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 PLK5Q496M5 336 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 PREPLQ4J6C6 727 aaPredicted RBP23.85■■□□□ 1.41
PTPN4-211ENST00000488279 USP39Q53GS9 565 aaKnown RBP23.85■■□□□ 1.41
PTPN4-211ENST00000488279 ZNF658Q5TYW1 1059 aaPredicted RBP23.85■■□□□ 1.41
PTPN4-211ENST00000488279 GPRIN1Q7Z2K8 1008 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 C12orf40Q86WS4 652 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 FBXL13Q8NEE6 735 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 SEMA4DQ92854 862 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 HEXIM2Q96MH2 286 aaKnown RBP23.85■■□□□ 1.41
PTPN4-211ENST00000488279 GSDMAQ96QA5 445 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 DUSP16Q9BY84 665 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 CYLDQ9NQC7 956 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 RAB20Q9NX57 234 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 PCDHGA5Q9Y5G8 931 aa23.85■■□□□ 1.41
PTPN4-211ENST00000488279 ANTXRLA6NF34 631 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 SLC30A4O14863 429 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 CYP26A1O43174 497 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 RHOBTB1O94844 696 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 SMC2O95347 1197 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 MXI1P50539 228 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 NUCB2P80303 420 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 GOLGA8FQ08AF8 430 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 GOLGA8DPQ0D2H9 430 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 MESP2Q0VG99 397 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 ELF2Q15723 593 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 CRY1Q16526 586 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 ANO4Q32M45 955 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 HSF5Q4G112 596 aaPredicted RBP23.84■■□□□ 1.41
PTPN4-211ENST00000488279 ZNF394Q53GI3 561 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 HTR3DQ70Z44 454 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 SFTPA1Q8IWL2 248 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 NAT16Q8N8M0 369 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 C12orf50Q8NA57 414 aaPredicted RBP23.84■■□□□ 1.41
PTPN4-211ENST00000488279 TSG101Q99816 390 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 SPHK2Q9NRA0 654 aa23.84■■□□□ 1.41
PTPN4-211ENST00000488279 DCLK1O15075 740 aa23.83■■□□□ 1.41
PTPN4-211ENST00000488279 HOXC11O43248 304 aaPredicted RBP23.83■■□□□ 1.41
PTPN4-211ENST00000488279 GDF9O60383 454 aa23.83■■□□□ 1.41
PTPN4-211ENST00000488279 TIE1P35590 1138 aa23.83■■□□□ 1.41
PTPN4-211ENST00000488279 CCDC6Q16204 474 aa23.83■■□□□ 1.41
PTPN4-211ENST00000488279 AASDHQ4L235 1098 aaPredicted RBP23.83■■□□□ 1.41
PTPN4-211ENST00000488279 COBLL1Q53SF7 1204 aa23.83■■□□□ 1.41
PTPN4-211ENST00000488279 PPP1R26Q5T8A7 1209 aaPredicted RBP23.83■■□□□ 1.41
PTPN4-211ENST00000488279 ANO7Q6IWH7 933 aa23.83■■□□□ 1.41
PTPN4-211ENST00000488279 NUDT18Q6ZVK8 323 aa23.83■■□□□ 1.41
PTPN4-211ENST00000488279 TMEM25Q86YD3 366 aa23.83■■□□□ 1.41
PTPN4-211ENST00000488279 ALLCQ8N6M5 410 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms