RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PAPSS1O43252 624 aaPredicted RBP11.61□□□□□ -0.55
UBE4B-210ENST00000488228 TLR5O60602 858 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 ERBB2P04626 1255 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 DDX6P26196 483 aaKnown RBP eCLIP11.61□□□□□ -0.55
UBE4B-210ENST00000488228 AVPR1AP37288 418 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 DAOAP59103 153 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 C2CD6Q53TS8 623 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 TANGO2Q6ICL3 276 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 HFE2Q6ZVN8 426 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 IRF2BP2Q7Z5L9 587 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 ZNF677Q86XU0 584 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 ARID3BQ8IVW6 561 aaPredicted RBP11.61□□□□□ -0.55
UBE4B-210ENST00000488228 CMTM8Q8IZV2 173 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 PLCD3Q8N3E9 789 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 ARL14EPQ8N8R7 260 aaPredicted RBP11.61□□□□□ -0.55
UBE4B-210ENST00000488228 RIN3Q8TB24 985 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 USP13Q92995 863 aaPredicted RBP11.61□□□□□ -0.55
UBE4B-210ENST00000488228 HSFY1Q96LI6 401 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 CYP2S1Q96SQ9 504 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 PCDHB18PQ96TA0 734 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 SYT11Q9BT88 431 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 RPP25Q9BUL9 199 aaKnown RBP11.61□□□□□ -0.55
UBE4B-210ENST00000488228 SLC4A5Q9BY07 1137 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 EDEM3Q9BZQ6 932 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 LHX5Q9H2C1 402 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 KCNK12Q9HB15 430 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 TLR8Q9NR97 1041 aaKnown RBP11.61□□□□□ -0.55
UBE4B-210ENST00000488228 SMPD4Q9NXE4 827 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 MUTYHQ9UIF7 546 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 NUDT5Q9UKK9 219 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 CAPN11Q9UMQ6 739 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 SCAMP3O14828 347 aaKnown RBP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 COCHO43405 550 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 MFAP3LO75121 409 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 LSM8O95777 96 aaKnown RBP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 OLFM2O95897 454 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 MBL2P11226 248 aaPredicted RBP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 SKILP12757 684 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 RARGP13631 454 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 CDH5P33151 784 aaPredicted RBP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 PPP3CCP48454 512 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 RPL34P49207 117 aaKnown RBP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 YWHAGP61981 247 aaKnown RBP eCLIP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 ZBED6P86452 979 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 USP4Q13107 963 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 TRIM14Q14142 442 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 GRM2Q14416 872 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 TDRD12Q587J7 1177 aaKnown RBP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 HECTD3Q5T447 861 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 PM20D1Q6GTS8 502 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 VITQ6UXI7 678 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 FAM183BPQ6ZVS7 135 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 MTSS1LQ765P7 747 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 SCUBE3Q8IX30 993 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 TMEM35BQ8NCS4 154 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 IPO4Q8TEX9 1081 aaKnown RBP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 STK32AQ8WU08 396 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 CPA5Q8WXQ8 436 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 EDEM1Q92611 657 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 KHSRPQ92945 711 aaKnown RBP eCLIP11.6□□□□□ -0.551e-8■□□□□ 10.9
UBE4B-210ENST00000488228 IQCDQ96DY2 449 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 PPP1R13BQ96KQ4 1090 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 NOX5Q96PH1 765 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 AGPAT1Q99943 283 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 PLA2G2FQ9BZM2 168 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 RNF38Q9H0F5 515 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 HAUS4Q9H6D7 363 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 SYNCQ9H7C4 482 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 CYLDQ9NQC7 956 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 CNGB3Q9NQW8 809 aa11.6□□□□□ -0.55
UBE4B-210ENST00000488228 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 LUC7L2Q9Y383 392 aaKnown RBP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.6□□□□□ -0.55
UBE4B-210ENST00000488228 HEPACAM2A8MVW5 462 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 NARSO43776 548 aaKnown RBP11.59□□□□□ -0.55
UBE4B-210ENST00000488228 ECI2O75521 394 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 FBXO21O94952 628 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 TBX18O95935 607 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 CYP1A1P04798 512 aaPredicted RBP11.59□□□□□ -0.55
UBE4B-210ENST00000488228 PLEKP08567 350 aaPredicted RBP11.59□□□□□ -0.55
UBE4B-210ENST00000488228 IRF1P10914 325 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 HDCP19113 662 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 PRKCIP41743 596 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 ACADSBP45954 432 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 TUBP50607 506 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 KLHL30Q0D2K2 578 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 CLEC16AQ2KHT3 1053 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 C10orf120Q5SQS8 335 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 SNX30Q5VWJ9 437 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 HGSNATQ68CP4 663 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 MMS22LQ6ZRQ5 1243 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 ZNF571Q7Z3V5 609 aaPredicted RBP11.59□□□□□ -0.55
UBE4B-210ENST00000488228 ZNF397Q8NF99 534 aaPredicted RBP11.59□□□□□ -0.55
UBE4B-210ENST00000488228 SLC30A5Q8TAD4 765 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 ELSPBP1Q96BH3 223 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 FAM149B1Q96BN6 582 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 MRFAP1L1Q96HT8 127 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
UBE4B-210ENST00000488228 LRRC3BQ96PB8 259 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 C11orf70Q9BRQ4 267 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms