RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 CCSER1Q9C0I3 900 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 SEPT3Q9UH03 358 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 NBASA2RRP1 2371 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 CENPEQ02224 2701 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 TRIM24O15164 1050 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 CLTAP09496 248 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 CYP2F1P24903 491 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 EVCP57679 992 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 INSM1Q01101 510 aaPredicted RBP12.51□□□□□ -0.41
TRIM56-204ENST00000487252 MCL1Q07820 350 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 TEAD4Q15561 434 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 NFE2Q16621 373 aaPredicted RBP12.51□□□□□ -0.41
TRIM56-204ENST00000487252 EARS2Q5JPH6 523 aaKnown RBP12.51□□□□□ -0.41
TRIM56-204ENST00000487252 RNF20Q5VTR2 975 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 C9orf57Q5W0N0 161 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 LSMEM2Q8N112 164 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 BRF1Q92994 677 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 OTUB2Q96DC9 234 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 ERLEC1Q96DZ1 483 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 PKMYT1Q99640 499 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
TRIM56-204ENST00000487252 MKRN2Q9H000 416 aaKnown RBP12.51□□□□□ -0.41
TRIM56-204ENST00000487252 TM9SF3Q9HD45 589 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 TBC1D14Q9P2M4 693 aa12.51□□□□□ -0.41
TRIM56-204ENST00000487252 TCHHQ07283 1943 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 CYB561D2O14569 222 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 SCAMP3O14828 347 aaKnown RBP12.5□□□□□ -0.41
TRIM56-204ENST00000487252 XPOTO43592 962 aaKnown RBP12.5□□□□□ -0.41
TRIM56-204ENST00000487252 DEXIO95424 95 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 HMGB1P09429 215 aaKnown RBP12.5□□□□□ -0.41
TRIM56-204ENST00000487252 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
TRIM56-204ENST00000487252 POU3F2P20265 443 aaPredicted RBP12.5□□□□□ -0.41
TRIM56-204ENST00000487252 IL9RQ01113 521 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 TLE1Q04724 770 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 RABEP1Q15276 862 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 FUT11Q495W5 492 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 WSCD1Q658N2 575 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 PIK3AP1Q6ZUJ8 805 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 METTL23Q86XA0 190 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 NAT16Q8N8M0 369 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 SAP25Q8TEE9 199 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 SEMA3CQ99985 751 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 NUP58Q9BVL2 599 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
TRIM56-204ENST00000487252 ASCL3Q9NQ33 180 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.5□□□□□ -0.41
TRIM56-204ENST00000487252 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 CPQQ9Y646 472 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 NUMA1Q14980 2115 aa12.5□□□□□ -0.41
TRIM56-204ENST00000487252 ARHGEF35A5YM69 484 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 LACTBL1A8MY62 500 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 WASH3PC4AMC7 463 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 PRRT4C9JH25 899 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 EPB41L2O43491 1005 aaKnown RBP12.49□□□□□ -0.41
TRIM56-204ENST00000487252 FAM189A1O60320 539 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 REC8O95072 547 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 C7P10643 843 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 ORC1Q13415 861 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 SHBQ15464 509 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 ARL13BQ3SXY8 428 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 CFAP221Q4G0U5 840 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 LAYNQ6UX15 382 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 Q6ZUG5 572 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 GATAD2AQ86YP4 633 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 TRIM22Q8IYM9 498 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 DAW1Q8N136 415 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 LIN37Q96GY3 246 aaPredicted RBP12.49□□□□□ -0.41
TRIM56-204ENST00000487252 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 RPF1Q9H9Y2 349 aaKnown RBP12.49□□□□□ -0.41
TRIM56-204ENST00000487252 CFAP97Q9P2B7 532 aa12.49□□□□□ -0.41
TRIM56-204ENST00000487252 CACNA1DQ01668 2161 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 ZNF840PA6NDX5 716 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 CCDC169A6NNP5 214 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 LAD1O00515 517 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 OAS1P00973 400 aaKnown RBP12.48□□□□□ -0.41
TRIM56-204ENST00000487252 RPA1P27694 616 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 PDIA3P30101 505 aaKnown RBP12.48□□□□□ -0.41
TRIM56-204ENST00000487252 GRIK1P39086 918 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 TXKP42681 527 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 LSSP48449 732 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 ZNF132P52740 706 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 PEX3P56589 373 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 PPP2R3AQ06190 1150 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
TRIM56-204ENST00000487252 ENPP2Q13822 863 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 ENOX2Q16206 610 aaKnown RBP12.48□□□□□ -0.41
TRIM56-204ENST00000487252 CALCRLQ16602 461 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 BTBD8Q5XKL5 378 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 ZPBP2Q6X784 338 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 DRC1Q96MC2 740 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 ORAI3Q9BRQ5 295 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 NTPCRQ9BSD7 190 aaKnown RBP12.48□□□□□ -0.41
TRIM56-204ENST00000487252 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRIM56-204ENST00000487252 ADAMTS1Q9UHI8 967 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms