RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 NDRG1Q92597 394 aaKnown RBP10.05□□□□□ -0.8
MCF2L-227ENST00000486806 TRIM44Q96DX7 344 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-227ENST00000486806 GUCD1Q96NT3 240 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 SLC2A13Q96QE2 648 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 GAS2L1Q99501 681 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-227ENST00000486806 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 IL21Q9HBE4 155 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 ZNF334Q9HCZ1 680 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-227ENST00000486806 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
MCF2L-227ENST00000486806 PARVAQ9NVD7 372 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 EHD2Q9NZN4 543 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 GMIPQ9P107 970 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 UVRAGQ9P2Y5 699 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 SALL4Q9UJQ4 1053 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 COG5Q9UP83 839 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 ZKSCAN5Q9Y2L8 839 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 C2CD4BA6NLJ0 364 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 SIGLEC16A6NMB1 481 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 USP27XA6NNY8 438 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 GOLGA8SH3BPF8 625 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 HSF2BPO75031 334 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 XYLBO75191 536 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 TBX10O75333 385 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 ABL1P00519 1130 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 LTFP02788 710 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 FYNP06241 537 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 SRGAP2BP0DMP2 458 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 FLT3P36888 993 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 HADHBP55084 474 aaKnown RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 RPL7AP62424 266 aaKnown RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 ZNF252P-AS1Q0IIN9 211 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 IFRD2Q12894 506 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 EFHC1Q5JVL4 640 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 ANKRD54Q6NXT1 300 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 HFE2Q6ZVN8 426 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 MON1AQ86VX9 555 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 REXO1L1PQ8IX06 675 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 CCAR2Q8N163 923 aaKnown RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 ELMOD1Q8N336 334 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 PDZD8Q8NEN9 1154 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 JOSD2Q8TAC2 188 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 ZNF564Q8TBZ8 553 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 FBXO32Q969P5 355 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 MCEEQ96PE7 176 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 CDX2Q99626 313 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 SELENOOQ9BVL4 669 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 NUP85Q9BW27 656 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 TSGA10Q9BZW7 698 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 TRIM7Q9C029 511 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 IGFLR1Q9H665 355 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 NMUR1Q9HB89 426 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 POPDC2Q9HBU9 364 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 MRPL47Q9HD33 250 aaKnown RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 OSGEPQ9NPF4 335 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 OSER1Q9NX31 292 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 CLIC5Q9NZA1 410 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 CLEC1BQ9P126 229 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 MYO1AQ9UBC5 1043 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 UXTQ9UBK9 157 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 TRIM10Q9UDY6 481 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 MAGED2Q9UNF1 606 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-227ENST00000486806 DUSP10Q9Y6W6 482 aa10.04□□□□□ -0.8
MCF2L-227ENST00000486806 CCDC195A0A1B0GUA6 201 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 A0A1W2PQH9 124 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 XIRP2A4UGR9 3374 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 ZNF840PA6NDX5 716 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 TMEM191CA6NGB0 347 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 NRG2O14511 850 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 DPYSL4O14531 572 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 ZSCAN12O43309 604 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 NCK2O43639 380 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 GRAP2O75791 330 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 F11P03951 625 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 KRT3P12035 628 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 IGFBP4P22692 258 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 CCR2P41597 374 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 PPP3CCP48454 512 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 PSEN1P49768 467 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 TUBP50607 506 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 YWHAGP61981 247 aaKnown RBP eCLIP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 YWHAZP63104 245 aaKnown RBP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 OGDHQ02218 1023 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 KIF5AQ12840 1032 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 OTUD1Q5VV17 481 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 BSPRYQ5W0U4 402 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 SYCE2Q6PIF2 218 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 GAREM2Q75VX8 874 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 BNIPLQ7Z465 357 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 HS6ST3Q8IZP7 471 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 ARHGAP18Q8N392 663 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 EMC1Q8N766 993 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 C12orf76Q8N812 135 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 LEMD2Q8NC56 503 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 SLC35G2Q8TBE7 412 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 FNIP1Q8TF40 1166 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 MYLIPQ8WY64 445 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 NT5C3BQ969T7 300 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 FAM149B1Q96BN6 582 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 PABPC5Q96DU9 382 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms