RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CXorf49A8MYA2 514 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-208ENST00000486641 ITM2AO43736 263 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 SIN3BO75182 1162 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 AVILO75366 819 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 LYPLA1O75608 230 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-208ENST00000486641 RFPL1O75677 317 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 ZMPSTE24O75844 475 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 FBXO21O94952 628 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 BPGMP07738 259 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 FAM58BPP0C7Q3 252 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 ARP10275 920 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 PORP16435 677 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-208ENST00000486641 MLH1P40692 756 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 CD151P48509 253 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 NRLP54845 237 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 C6orf52Q5T4I8 152 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 PLA2G4FQ68DD2 849 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 SLC26A11Q86WA9 606 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 ERI1Q8IV48 349 aaKnown RBP11.05□□□□□ -0.64
CCDC171-208ENST00000486641 UNC45BQ8IWX7 931 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 CTAGE3PQ8IX95 158 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 CCDC33Q8N5R6 958 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 RSAD2Q8WXG1 361 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 TMIGD2Q96BF3 282 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 XAB2Q9HCS7 855 aaKnown RBP11.05□□□□□ -0.64
CCDC171-208ENST00000486641 PARVAQ9NVD7 372 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 C6orf203Q9P0P8 240 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-208ENST00000486641 THEGQ9P2T0 379 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 PSMD13Q9UNM6 376 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 GNEQ9Y223 722 aaKnown RBP11.05□□□□□ -0.64
CCDC171-208ENST00000486641 SCINQ9Y6U3 715 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 ZHX2Q9Y6X8 837 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 ABCA3Q99758 1704 aa11.05□□□□□ -0.64
CCDC171-208ENST00000486641 KANSL1LA0AUZ9 987 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 SH3PXD2BA1X283 911 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 TRIM43BA6NCK2 446 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 TMEM191CA6NGB0 347 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 RGL2O15211 777 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 TRPA1O75762 1119 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 C1QAP02745 245 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 SNRPAP09012 282 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 TMEM191BP0C7N4 346 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 IDO1P14902 403 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 L1CAMP32004 1257 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 OXCT1P55809 520 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 PEX3P56589 373 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 BASP1P80723 227 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 GSTM4Q03013 218 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 IKQ13123 557 aaPredicted RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 BMPR2Q13873 1038 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 ADRM1Q16186 407 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 MEX3CQ5U5Q3 659 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 ENOSF1Q7L5Y1 443 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 PHF13Q86YI8 300 aaPredicted RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 TFB1MQ8WVM0 346 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 VCPIP1Q96JH7 1222 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 CSRNP1Q96S65 589 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 ZNF577Q9BSK1 485 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 RMI1Q9H9A7 625 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 THAP1Q9NVV9 213 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 RSL24D1Q9UHA3 163 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 PACSIN3Q9UKS6 424 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 APOBEC2Q9Y235 224 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 TEX264Q9Y6I9 313 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 RBM47A0AV96 593 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 DDX39AO00148 427 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 UGT1A9O60656 530 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 IL1R1P14778 569 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 PTPN7P35236 360 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 MTTPP55157 894 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 CDKL1Q00532 357 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 OGDHQ02218 1023 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 PDK1Q15118 436 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 ANGEL2Q5VTE6 544 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 POTEHQ6S545 545 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 FRMD7Q6ZUT3 714 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 PTF1AQ7RTS3 328 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 PATL1Q86TB9 770 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 RSPH3Q86UC2 560 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 CROCCP3Q8IVE0 287 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 WDR75Q8IWA0 830 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 ABRAQ8N0Z2 381 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 TEKT1Q969V4 418 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 CFAP36Q96G28 342 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 MFSD14AQ96MC6 490 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 UGT1A7Q9HAW7 530 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 UGT1A10Q9HAW8 530 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 UGT1A8Q9HAW9 530 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 GPRC5CQ9NQ84 441 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 SRP68Q9UHB9 627 aaKnown RBP11.04□□□□□ -0.64
CCDC171-208ENST00000486641 DNAJC16Q9Y2G8 782 aa11.04□□□□□ -0.64
CCDC171-208ENST00000486641 C3orf70A6NLC5 250 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-208ENST00000486641 TOM1L1O75674 476 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 KRT37O76014 449 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 TOP3BO95985 862 aaKnown RBP11.03□□□□□ -0.64
CCDC171-208ENST00000486641 PDGFRBP09619 1106 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 THRAP10827 490 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 CPA3P15088 417 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 ENTPD1P49961 510 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms