RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PHACTR1Q9C0D0 580 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 FARP1Q9Y4F1 1045 aaPredicted RBP21.25■□□□□ 0.99
HPS3-206ENST00000486530 GABRDO14764 452 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 RBP3P10745 1247 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 ROR1Q01973 937 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 LONRF1Q17RB8 773 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 PPIL6Q8IXY8 311 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 PCSK9Q8NBP7 692 aaKnown RBP21.24■□□□□ 0.99
HPS3-206ENST00000486530 PRCCQ92733 491 aaPredicted RBP21.24■□□□□ 0.99
HPS3-206ENST00000486530 P3H4Q92791 437 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 C9orf72Q96LT7 481 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 CCDC77Q9BR77 488 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 ZNF670Q9BS34 389 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 DUSP16Q9BY84 665 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 PCDH18Q9HCL0 1135 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 SAYSD1Q9NPB0 183 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 SMAPO00193 183 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 PTPN1P18031 435 aaKnown RBP21.24■□□□□ 0.99
HPS3-206ENST00000486530 TGM2P21980 687 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 CTCFP49711 727 aaPredicted RBP21.24■□□□□ 0.99
HPS3-206ENST00000486530 IFI35P80217 286 aaPredicted RBP21.24■□□□□ 0.99
HPS3-206ENST00000486530 STAT4Q14765 748 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 EFHC1Q5JVL4 640 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 WSCD1Q658N2 575 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 FUKQ8N0W3 1084 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 TMEM86AQ8N2M4 240 aa21.24■□□□□ 0.99
HPS3-206ENST00000486530 THSD7BQ9C0I4 1608 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 NDUFAB1O14561 156 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 NPR3P17342 541 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 STIP1P31948 543 aaKnown RBP21.23■□□□□ 0.99
HPS3-206ENST00000486530 THPOP40225 353 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 RAB27AP51159 221 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 ZC3H12AQ5D1E8 599 aaKnown RBP21.23■□□□□ 0.99
HPS3-206ENST00000486530 CENPUQ71F23 418 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 MRPL10Q7Z7H8 261 aaKnown RBP21.23■□□□□ 0.99
HPS3-206ENST00000486530 UNC45BQ8IWX7 931 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 CENPTQ96BT3 561 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 FAF2Q96CS3 445 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 SENP8Q96LD8 212 aa21.23■□□□□ 0.99
HPS3-206ENST00000486530 TDRD15B5MCY1 1934 aaKnown RBP21.23■□□□□ 0.99
HPS3-206ENST00000486530 APOL1O14791 398 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 RPL22P35268 128 aaKnown RBP21.22■□□□□ 0.99
HPS3-206ENST00000486530 ANKRD20A8PQ5CZ79 823 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 ERMARDQ5T6L9 678 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 SLC9A4Q6AI14 798 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 PIGZQ86VD9 579 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 LPPQ93052 612 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 SELENOSQ9BQE4 189 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 C10orf88Q9H8K7 445 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 AGO3Q9H9G7 860 aaKnown RBP21.22■□□□□ 0.99
HPS3-206ENST00000486530 GPATCH2LQ9NWQ4 482 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.22■□□□□ 0.99
HPS3-206ENST00000486530 A0A087WUV0 522 aaPredicted RBP21.22■□□□□ 0.99
HPS3-206ENST00000486530 ARL5CA6NH57 179 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 ATP2C2O75185 946 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 IL4RP24394 825 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 ACAT1P24752 427 aaKnown RBP21.22■□□□□ 0.99
HPS3-206ENST00000486530 LHX1P48742 406 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 DPYSL2Q16555 572 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 CCDC142Q17RM4 750 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 DARS2Q6PI48 645 aaKnown RBP21.22■□□□□ 0.99
HPS3-206ENST00000486530 NPNTQ6UXI9 565 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 AGMOQ6ZNB7 445 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 STRADAQ7RTN6 431 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 RNF180Q86T96 592 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 FAM71DQ8N9W8 422 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 KCTD13Q8WZ19 329 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 CPT1BQ92523 772 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 RABEP2Q9H5N1 569 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 DDX43Q9NXZ2 648 aaKnown RBP21.22■□□□□ 0.99
HPS3-206ENST00000486530 RSPH14Q9UHP6 348 aa21.22■□□□□ 0.99
HPS3-206ENST00000486530 TSC2P49815 1807 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 TRAPPC3O43617 180 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 FKTNO75072 461 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 RPL9P32969 192 aaKnown RBP21.21■□□□□ 0.99
HPS3-206ENST00000486530 CCT5P48643 541 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 CLCNKBP51801 687 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 ADIGQ0VDE8 80 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 NLRP14Q86W24 1093 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 PLD5Q8N7P1 536 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 NAT8LQ8N9F0 302 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 LGALS13Q9UHV8 139 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 PADI3Q9ULW8 664 aa21.21■□□□□ 0.99
HPS3-206ENST00000486530 E7EVH7 732 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ALOX15BO15296 676 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ZNF623O75123 536 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 CDH16O75309 829 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 DAB1O75553 588 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 TFE3P19532 575 aaPredicted RBP21.2■□□□□ 0.98
HPS3-206ENST00000486530 MATKP42679 507 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 SCNN1GP51170 649 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ACLYP53396 1101 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 BCAR1P56945 870 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ITGA7Q13683 1181 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 HIF1AQ16665 826 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 CA9Q16790 459 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 MDH1BQ5I0G3 518 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 PAQR9Q6ZVX9 377 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 RIBC1Q8N443 379 aaPredicted RBP21.2■□□□□ 0.98
HPS3-206ENST00000486530 PQLC3Q8N755 202 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms