RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CALN1Q9BXU9 219 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 MAK16Q9BXY0 300 aaKnown RBP12.48□□□□□ -0.41
PKP4-213ENST00000486254 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 NGRNQ9NPE2 291 aaKnown RBP12.48□□□□□ -0.41
PKP4-213ENST00000486254 CREBZFQ9NS37 354 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 TMEM51Q9NW97 253 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 LGALS13Q9UHV8 139 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 STAP1Q9ULZ2 295 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 PATJQ8NI35 1801 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 SGK1O00141 431 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 APOL1O14791 398 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 EOMESO95936 686 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CD48P09326 243 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 RBP3P10745 1247 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 COL6A1P12109 1028 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 IL4RP24394 825 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CD52P31358 61 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 NOS2P35228 1153 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CHKAP35790 457 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ZNF135P52742 658 aaPredicted RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 EIF3EP60228 445 aaKnown RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 MRPS5P82675 430 aaKnown RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 ADCY1Q08828 1119 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 GPS1Q13098 491 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TUSC3Q13454 348 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 KRT81Q14533 505 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ARHGEF6Q15052 776 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 RAB41Q5JT25 222 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ERMARDQ5T6L9 678 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ZNF618Q5T7W0 954 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CLEC20AQ6ZU45 233 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 PAQR9Q6ZVX9 377 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 BEND5Q7L4P6 421 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TDRPQ86YL5 185 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 PPIL6Q8IXY8 311 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 MYCBPAPQ8TBZ2 947 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 HSPH1Q92598 858 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 PRCCQ92733 491 aaPredicted RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 P3H4Q92791 437 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ACSF2Q96CM8 615 aaPredicted RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 HAUS1Q96CS2 278 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 GLT1D1Q96MS3 346 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 RBM15Q96T37 977 aaKnown RBP eCLIP12.47□□□□□ -0.41
PKP4-213ENST00000486254 SYT15Q9BQS2 421 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ACBD6Q9BR61 282 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TRIM62Q9BVG3 475 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CSNK1G1Q9HCP0 422 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CNGB3Q9NQW8 809 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 NINJ2Q9NZG7 142 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CWC15Q9P013 229 aaKnown RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 PTPRDP23468 1912 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 BCLAF3A2AJT9 711 aaKnown RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 MEIS3P2A8K0S8 358 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 E7ESA3 106 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TMEM189-UBE2V1I3L0A0 370 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ALOX15BO15296 676 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 RGS16O15492 202 aaPredicted RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 SHBGP04278 402 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TYMPP19971 482 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 MAP2K2P36507 400 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 MAGEA6P43360 314 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 MMP13P45452 471 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 SCNN1GP51170 649 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 YWHAZP63104 245 aaKnown RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 CAP1Q01518 475 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ROR1Q01973 937 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TRIP13Q15645 432 aaPredicted RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 MAPRE1Q15691 268 aaKnown RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 ZSCAN26Q16670 478 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 DEFB115Q30KQ5 88 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ANKRD20A8PQ5CZ79 823 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 PAXIP1Q6ZW49 1069 aaPredicted RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 CENPUQ71F23 418 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TAOK1Q7L7X3 1001 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 PLD5Q8N7P1 536 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 SLAIN1Q8ND83 568 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 IRGQQ8WZA9 623 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 NTAN1Q96AB6 310 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 PGAP3Q96FM1 320 aaPredicted RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 SMARCD1Q96GM5 515 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 NPY6RQ99463 290 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CCDC77Q9BR77 488 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 TMEM121Q9BTD3 319 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 B3GNT5Q9BYG0 378 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 CRTAC1Q9NQ79 661 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
PKP4-213ENST00000486254 NOD1Q9Y239 953 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 ACTL7BQ9Y614 415 aa12.47□□□□□ -0.41
PKP4-213ENST00000486254 HCRTO43612 131 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 MGEA5O60502 916 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 CDH16O75309 829 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 GHRP10912 638 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 ELNP15502 786 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 PECAM1P16284 738 aaPredicted RBP12.46□□□□□ -0.42
PKP4-213ENST00000486254 L1CAMP32004 1257 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms