RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 BRD9Q9H8M2 597 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 KIF9Q9HAQ2 790 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 OSER1Q9NX31 292 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 CYTH4Q9UIA0 394 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 FBXL21Q9UKT6 434 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 CEP83Q9Y592 693 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 CPQQ9Y646 472 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 LRRC53A6NM62 1247 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 E5RJQ4 531 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 PI4K2BG5E9Z4 385 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 GABBR2O75899 941 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 OLFM2O95897 454 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 MMEP08473 750 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 RALAP11233 206 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 PFKLP17858 780 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 WEE1P30291 646 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 ACADSBP45954 432 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 PSEN1P49768 467 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 TUBP50607 506 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 DAOAP59103 153 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 YWHAGP61981 247 aaKnown RBP eCLIP12.44□□□□□ -0.42
HPS4-214ENST00000485842 GPC5P78333 572 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 USP4Q13107 963 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 ZNF268Q14587 947 aaPredicted RBP12.44□□□□□ -0.42
HPS4-214ENST00000485842 C10orf120Q5SQS8 335 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 SNX30Q5VWJ9 437 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 BTBD8Q5XKL5 378 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 RSRC2Q7L4I2 434 aaKnown RBP12.44□□□□□ -0.42
HPS4-214ENST00000485842 ARHGAP18Q8N392 663 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 RIN3Q8TB24 985 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 BPIFB1Q8TDL5 484 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 SH3RF2Q8TEC5 729 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 CLEC4CQ8WTT0 213 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 BAP1Q92560 729 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 EDAQ92838 391 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 ZFYVE19Q96K21 471 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 LRRC3BQ96PB8 259 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 NOX5Q96PH1 765 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 RBSNQ9H1K0 784 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 CNGB3Q9NQW8 809 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
HPS4-214ENST00000485842 OBP2AQ9NY56 170 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 TJP2Q9UDY2 1190 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 NOCTQ9UK39 431 aaKnown RBP12.44□□□□□ -0.42
HPS4-214ENST00000485842 ARHGAP26Q9UNA1 814 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 A0A0C4DFX4 3053 aa12.44□□□□□ -0.42
HPS4-214ENST00000485842 KIF26AQ9ULI4 1882 aaPredicted RBP12.44□□□□□ -0.42
HPS4-214ENST00000485842 TICRRQ7Z2Z1 1910 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 YJEFN3A6XGL0 299 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 E7ENQ6 273 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 SCAMP3O14828 347 aaKnown RBP12.43□□□□□ -0.42
HPS4-214ENST00000485842 ZNF263O14978 683 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 MDM4O15151 490 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 FBXO21O94952 628 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 TBX18O95935 607 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 IRF1P10914 325 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 FERP16591 822 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 ATP5C1P36542 298 aaKnown RBP12.43□□□□□ -0.42
HPS4-214ENST00000485842 PBX1P40424 430 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 SLC7A9P82251 487 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 CDR2Q01850 454 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 SIGLEC14Q08ET2 396 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 MTF1Q14872 753 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 ZNF77Q15935 545 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 PM20D1Q6GTS8 502 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 HFE2Q6ZVN8 426 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 BHLHA9Q7RTU4 235 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 WDTC1Q8N5D0 677 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 TMEM35BQ8NCS4 154 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 IPO4Q8TEX9 1081 aaKnown RBP12.43□□□□□ -0.42
HPS4-214ENST00000485842 DDX1Q92499 740 aaKnown RBP12.43□□□□□ -0.42
HPS4-214ENST00000485842 EDEM1Q92611 657 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 PPP1R13BQ96KQ4 1090 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 CPXM1Q96SM3 734 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 TTYH3Q9C0H2 523 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 LHX5Q9H2C1 402 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 SYNCQ9H7C4 482 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 CYLDQ9NQC7 956 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 SEPT11Q9NVA2 429 aaKnown RBP12.43□□□□□ -0.42
HPS4-214ENST00000485842 THG1LQ9NWX6 298 aaKnown RBP12.43□□□□□ -0.42
HPS4-214ENST00000485842 CFAP97Q9P2B7 532 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 RASAL2Q9UJF2 1139 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 CA14Q9ULX7 337 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 CUL9Q8IWT3 2517 aa12.43□□□□□ -0.42
HPS4-214ENST00000485842 FAM86C2PA6NEL3 165 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 LEFTY2O00292 366 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 LTFP02788 710 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 CHRNB2P17787 502 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 ZXDBP98169 803 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 FMO1Q01740 532 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 FCHO2Q0JRZ9 810 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 EFEMP1Q12805 493 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 ASIC2Q16515 512 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 PTPN20Q4JDL3 420 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 ARHGAP29Q52LW3 1261 aa12.42□□□□□ -0.42
HPS4-214ENST00000485842 SFMBT2Q5VUG0 894 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms