RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ATRIPQ8WXE1 791 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 NT5C3BQ969T7 300 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 PABPC5Q96DU9 382 aaKnown RBP16.63■□□□□ 0.25
APOE-205ENST00000485628 GAS2L1Q99501 681 aaPredicted RBP16.63■□□□□ 0.25
APOE-205ENST00000485628 DESI2Q9BSY9 194 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 SFXN1Q9H9B4 322 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 OSER1Q9NX31 292 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.63■□□□□ 0.25
APOE-205ENST00000485628 EHD2Q9NZN4 543 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 SALL4Q9UJQ4 1053 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 PYCARDQ9ULZ3 195 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.62■□□□□ 0.25
APOE-205ENST00000485628 CCL16O15467 120 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 NRDCO43847 1150 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 TBX10O75333 385 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 MOSPD3O75425 235 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 ABL1P00519 1130 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 LRG1P02750 347 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 ARHGAP25P42331 645 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 PPP3CCP48454 512 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 DLX2Q07687 328 aaPredicted RBP16.62■□□□□ 0.25
APOE-205ENST00000485628 TAF10Q12962 218 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 EIF4EBP2Q13542 120 aaPredicted RBP16.62■□□□□ 0.25
APOE-205ENST00000485628 VEPH1Q14D04 833 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 TAF5Q15542 800 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 EFHC1Q5JVL4 640 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 PRSS36Q5K4E3 855 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 ELMSAN1Q6PJG2 1045 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 HFE2Q6ZVN8 426 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 GPR149Q86SP6 731 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 REXO1L1PQ8IX06 675 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 DEFB123Q8N688 67 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 SLC2A13Q96QE2 648 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 IGFLR1Q9H665 355 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 NMUR1Q9HB89 426 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 CLIC5Q9NZA1 410 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 UXTQ9UBK9 157 aaPredicted RBP16.62■□□□□ 0.25
APOE-205ENST00000485628 CNOT8Q9UFF9 292 aaKnown RBP16.62■□□□□ 0.25
APOE-205ENST00000485628 TFR2Q9UP52 801 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 COG5Q9UP83 839 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 PPP2R2CQ9Y2T4 447 aa16.62■□□□□ 0.25
APOE-205ENST00000485628 FAM170AA1A519 330 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 ZNF840PA6NDX5 716 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 TMEM191CA6NGB0 347 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 SART1O43290 800 aaKnown RBP16.61■□□□□ 0.25
APOE-205ENST00000485628 PTPN2P17706 415 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 ABCB4P21439 1286 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 CCR2P41597 374 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 OR6B2Q6IFH4 312 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 HS6ST3Q8IZP7 471 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 SIX6OS1Q8N1H7 587 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 C12orf76Q8N812 135 aaPredicted RBP16.61■□□□□ 0.25
APOE-205ENST00000485628 FNIP1Q8TF40 1166 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 ZNF653Q96CK0 615 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 ZNF512Q96ME7 567 aaPredicted RBP16.61■□□□□ 0.25
APOE-205ENST00000485628 PARVAQ9NVD7 372 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 HCFC1R1Q9NWW0 138 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 GMIPQ9P107 970 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 UVRAGQ9P2Y5 699 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 CHORDC1Q9UHD1 332 aaPredicted RBP16.61■□□□□ 0.25
APOE-205ENST00000485628 DUSP10Q9Y6W6 482 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 EYSQ5T1H1 3165 aa16.61■□□□□ 0.25
APOE-205ENST00000485628 C2CD4BA6NLJ0 364 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 ATMINO43313 823 aaPredicted RBP16.6■□□□□ 0.25
APOE-205ENST00000485628 HSF2BPO75031 334 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 XYLBO75191 536 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 LTFP02788 710 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 CCDC175P0C221 793 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 IGFBP4P22692 258 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 RFC1P35251 1148 aaPredicted RBP16.6■□□□□ 0.25
APOE-205ENST00000485628 PSEN1P49768 467 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 TUBP50607 506 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 RPL7AP62424 266 aaKnown RBP16.6■□□□□ 0.25
APOE-205ENST00000485628 YWHAZP63104 245 aaKnown RBP16.6■□□□□ 0.25
APOE-205ENST00000485628 BSPRYQ5W0U4 402 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 POTEHQ6S545 545 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 LEMD2Q8NC56 503 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 PDZD8Q8NEN9 1154 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 JOSD2Q8TAC2 188 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 SLC35G2Q8TBE7 412 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 KIAA1524Q8TCG1 905 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 CTNNBL1Q8WYA6 563 aaPredicted RBP16.6■□□□□ 0.25
APOE-205ENST00000485628 RFFLQ8WZ73 363 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 FBXO32Q969P5 355 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 DDX23Q9BUQ8 820 aaKnown RBP16.6■□□□□ 0.25
APOE-205ENST00000485628 ADAM33Q9BZ11 813 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 ADAM7Q9H2U9 754 aa16.6■□□□□ 0.25
APOE-205ENST00000485628 LUC7LQ9NQ29 371 aaKnown RBP16.6■□□□□ 0.25
APOE-205ENST00000485628 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.6■□□□□ 0.25
APOE-205ENST00000485628 A0A1W2PQH9 124 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 SOBPA7XYQ1 873 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 ENDOD1O94919 500 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 IPO7O95373 1038 aaKnown RBP16.59■□□□□ 0.25
APOE-205ENST00000485628 GJB6O95452 261 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 OLFM2O95897 454 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 IGLV3-25P01717 112 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 RHOP08100 348 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 KRT3P12035 628 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 FLT3P36888 993 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms