RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 PRKAR1BP31321 381 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 PGDP52209 483 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 DEUP1Q05D60 604 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 ARHGEF7Q14155 803 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 POLD3Q15054 466 aaPredicted RBP3.95□□□□□ -1.78
VPS50-216ENST00000484954 MIS18BP1Q6P0N0 1132 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 UNC13DQ70J99 1090 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 SFTPA1Q8IWL2 248 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 LINC01465Q8N7H1 131 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 C11orf44Q8N8P7 122 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 MAFAQ8NHW3 353 aaPredicted RBP3.95□□□□□ -1.78
VPS50-216ENST00000484954 TTC8Q8TAM2 541 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 APOL5Q9BWW9 433 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 ZNF287Q9HBT7 754 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 ITGB1BP2Q9UKP3 347 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 OGDHLQ9ULD0 1010 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 RIMKLBQ9ULI2 386 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 FRMPD2Q68DX3 1309 aaPredicted RBP3.95□□□□□ -1.78
VPS50-216ENST00000484954 ZNF521Q96K83 1311 aa3.95□□□□□ -1.78
VPS50-216ENST00000484954 CYP2D7A0A087X1C5 515 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 PSMD9O00233 223 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 GOLIM4O00461 696 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 EXOC5O00471 708 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 FCHO1O14526 889 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 ADAM10O14672 748 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 CCP110O43303 1012 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 MARCH6O60337 910 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 MOSPD3O75425 235 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 GCATO75600 419 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 USP1O94782 785 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 MT-CO3P00414 261 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 HRGP04196 525 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 CHRM5P08912 532 aaPredicted RBP3.94□□□□□ -1.78
VPS50-216ENST00000484954 PARP1P09874 1014 aaKnown RBP3.94□□□□□ -1.78
VPS50-216ENST00000484954 CREB1P16220 341 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 ATF7P17544 494 aaPredicted RBP3.94□□□□□ -1.78
VPS50-216ENST00000484954 ATP5F1P24539 256 aaPredicted RBP3.94□□□□□ -1.78
VPS50-216ENST00000484954 CPT1AP50416 773 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 GATMP50440 423 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 CACNB3P54284 484 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 SUMO2P61956 95 aaKnown RBP3.94□□□□□ -1.78
VPS50-216ENST00000484954 SLC29A2Q14542 456 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 GBX1Q14549 363 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 CERKLQ49MI3 558 aaPredicted RBP3.94□□□□□ -1.78
VPS50-216ENST00000484954 DARS2Q6PI48 645 aaKnown RBP3.94□□□□□ -1.78
VPS50-216ENST00000484954 USP49Q70CQ1 688 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 PNISRQ8TF01 805 aaKnown RBP3.94□□□□□ -1.78
VPS50-216ENST00000484954 TIFAQ96CG3 184 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 LRRC27Q9C0I9 530 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 VPS16Q9H269 839 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 OBP2AQ9NY56 170 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 DKK4Q9UBT3 224 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 TCEAL9Q9UHQ7 104 aa3.94□□□□□ -1.78
VPS50-216ENST00000484954 E5RJQ4 531 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 UBE2Q2LH0YL09 131 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 RHCEP18577 417 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 BTF3P20290 206 aaKnown RBP3.93□□□□□ -1.78
VPS50-216ENST00000484954 CARSP49589 748 aaKnown RBP3.93□□□□□ -1.78
VPS50-216ENST00000484954 MTHFSP49914 203 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 HTRA4P83105 476 aaPredicted RBP3.93□□□□□ -1.78
VPS50-216ENST00000484954 RHDQ02161 417 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 SEMA5AQ13591 1074 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 FHL3Q13643 280 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 ZNF268Q14587 947 aaPredicted RBP3.93□□□□□ -1.78
VPS50-216ENST00000484954 RABEP1Q15276 862 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 PLAG1Q6DJT9 500 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 SRGAP1Q7Z6B7 1085 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 ADAMTS18Q8TE60 1221 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 DENND1AQ8TEH3 1009 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 IGFBPL1Q8WX77 278 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 ZBTB9Q96C00 473 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 DHX36Q9H2U1 1008 aaKnown RBP3.93□□□□□ -1.78
VPS50-216ENST00000484954 ELOVL5Q9NYP7 299 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 TFCP2L1Q9NZI6 479 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 KLHL42Q9P2K6 505 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 VPS51Q9UID3 782 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 PAXBP1Q9Y5B6 917 aa3.93□□□□□ -1.78
VPS50-216ENST00000484954 PPEF2O14830 753 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 MT-ND5P03915 603 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 TPH1P17752 444 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 IL1R2P27930 398 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 HOXD9P28356 352 aaPredicted RBP3.92□□□□□ -1.78
VPS50-216ENST00000484954 FAM193AP78312 1265 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 LARS2Q15031 903 aaKnown RBP3.92□□□□□ -1.78
VPS50-216ENST00000484954 MEX3CQ5U5Q3 659 aaKnown RBP3.92□□□□□ -1.78
VPS50-216ENST00000484954 MANEALQ5VSG8 457 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 TMEM65Q6PI78 240 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 ZNF813Q6ZN06 617 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 DCDC5Q6ZRR9 648 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 ZNF398Q8TD17 642 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 PRR11Q96HE9 360 aaPredicted RBP3.92□□□□□ -1.78
VPS50-216ENST00000484954 KAZALD1Q96I82 304 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 CCDC17Q96LX7 622 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 FYTTD1Q96QD9 318 aaKnown RBP3.92□□□□□ -1.78
VPS50-216ENST00000484954 TBC1D23Q9NUY8 699 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 MGAT4CQ9UBM8 478 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 SLC27A6Q9Y2P4 619 aa3.92□□□□□ -1.78
VPS50-216ENST00000484954 A0A087WZ62 844 aa3.91□□□□□ -1.78
VPS50-216ENST00000484954 BTBD19C9JJ37 291 aa3.91□□□□□ -1.78
VPS50-216ENST00000484954 TMEM232C9JQI7 657 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms