RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 LRRC27Q9C0I9 530 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 TMEM60Q9H2L4 133 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 LPAR3Q9UBY5 353 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.01□□□□□ -1.61
SMC4-215ENST00000484799 TCRBV5S1A1TA0A578 114 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 GOLGA6CA6NDK9 693 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 GOLGA6BA6NDN3 693 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 AQP7P3A6NL99 342 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 FCHO1O14526 889 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 TBX3O15119 743 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 PRPF3O43395 683 aaKnown RBP5.01□□□□□ -1.61
SMC4-215ENST00000484799 GOLGA6DP0CG33 693 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 YY1P25490 414 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 TIRAPP58753 221 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 PPP2R5AQ15172 486 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 DARS2Q6PI48 645 aaKnown RBP5.01□□□□□ -1.61
SMC4-215ENST00000484799 OVCH2Q7RTZ1 564 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 OR56A3Q8NH54 315 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 C16orf52Q8NHV5 167 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 NSMCE1Q8WV22 266 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 ZNF668Q96K58 619 aaPredicted RBP5.01□□□□□ -1.61
SMC4-215ENST00000484799 SMURF2Q9HAU4 748 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 USP29Q9HBJ7 922 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 GOLGA6AQ9NYA3 693 aa5.01□□□□□ -1.61
SMC4-215ENST00000484799 FNDC1Q4ZHG4 1894 aaPredicted RBP5□□□□□ -1.61
SMC4-215ENST00000484799 S100BP04271 92 aaPredicted RBP5□□□□□ -1.61
SMC4-215ENST00000484799 CD63P08962 238 aa5□□□□□ -1.61
SMC4-215ENST00000484799 DIO1P49895 249 aa5□□□□□ -1.61
SMC4-215ENST00000484799 CPT1AP50416 773 aa5□□□□□ -1.61
SMC4-215ENST00000484799 PSG6Q00889 435 aa5□□□□□ -1.61
SMC4-215ENST00000484799 KCNB1Q14721 858 aa5□□□□□ -1.61
SMC4-215ENST00000484799 ST3GAL2Q16842 350 aa5□□□□□ -1.61
SMC4-215ENST00000484799 KIAA0753Q2KHM9 967 aa5□□□□□ -1.61
SMC4-215ENST00000484799 C3orf38Q5JPI3 329 aa5□□□□□ -1.61
SMC4-215ENST00000484799 RNF220Q5VTB9 566 aa5□□□□□ -1.61
SMC4-215ENST00000484799 MZT2AQ6P582 158 aa5□□□□□ -1.61
SMC4-215ENST00000484799 KCTD20Q7Z5Y7 419 aa5□□□□□ -1.61
SMC4-215ENST00000484799 KRT73Q86Y46 540 aa5□□□□□ -1.61
SMC4-215ENST00000484799 SDR16C5Q8N3Y7 309 aa5□□□□□ -1.61
SMC4-215ENST00000484799 MAFAQ8NHW3 353 aaPredicted RBP5□□□□□ -1.61
SMC4-215ENST00000484799 STAG1Q8WVM7 1258 aa5□□□□□ -1.61
SMC4-215ENST00000484799 HIST1H2AAQ96QV6 131 aa5□□□□□ -1.61
SMC4-215ENST00000484799 TRIM36Q9NQ86 728 aa5□□□□□ -1.61
SMC4-215ENST00000484799 POT1Q9NUX5 634 aa5□□□□□ -1.61
SMC4-215ENST00000484799 STEAP1Q9UHE8 339 aa5□□□□□ -1.61
SMC4-215ENST00000484799 L1RE1Q9UN81 338 aa5□□□□□ -1.61
SMC4-215ENST00000484799 TRIM43BA6NCK2 446 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 E5RJQ4 531 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 CD3EAPO15446 510 aaKnown RBP4.99□□□□□ -1.61
SMC4-215ENST00000484799 USP12O75317 370 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 HGFP14210 728 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 SFPQP23246 707 aaKnown RBP eCLIP4.99□□□□□ -1.61
SMC4-215ENST00000484799 TKTP29401 623 aaKnown RBP4.99□□□□□ -1.61
SMC4-215ENST00000484799 ID2Q02363 134 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 STIM1Q13586 685 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 RBMS2Q15434 407 aaKnown RBP4.99□□□□□ -1.61
SMC4-215ENST00000484799 FAM110CQ1W6H9 321 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 MEX3CQ5U5Q3 659 aaKnown RBP4.99□□□□□ -1.61
SMC4-215ENST00000484799 AWAT2Q6E213 333 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 PIM3Q86V86 326 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 P3H2Q8IVL5 708 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 C12orf76Q8N812 135 aaPredicted RBP4.99□□□□□ -1.61
SMC4-215ENST00000484799 C11orf44Q8N8P7 122 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 C9orf106Q8NAJ2 232 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 LRTOMTQ8WZ04 291 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 TRIM43Q96BQ3 446 aaPredicted RBP4.99□□□□□ -1.61
SMC4-215ENST00000484799 NMD3Q96D46 503 aaKnown RBP4.99□□□□□ -1.61
SMC4-215ENST00000484799 DHX36Q9H2U1 1008 aaKnown RBP4.99□□□□□ -1.61
SMC4-215ENST00000484799 FAM83DQ9H4H8 585 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 ATP6V0A4Q9HBG4 840 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 AFG3L2Q9Y4W6 797 aa4.99□□□□□ -1.61
SMC4-215ENST00000484799 CLIC1O00299 241 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 RRP9O43818 475 aaKnown RBP4.98□□□□□ -1.61
SMC4-215ENST00000484799 HOXB6P17509 224 aaKnown RBP4.98□□□□□ -1.61
SMC4-215ENST00000484799 ACVR2AP27037 513 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 TACR3P29371 465 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 TXNL4AP83876 142 aaKnown RBP4.98□□□□□ -1.61
SMC4-215ENST00000484799 FMO1Q01740 532 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 CFHR3Q02985 330 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 MFSD13AQ14CX5 517 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 LARS2Q15031 903 aaKnown RBP4.98□□□□□ -1.61
SMC4-215ENST00000484799 ZNF750Q32MQ0 723 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 FAM102BQ5T8I3 360 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 CLEC9AQ6UXN8 241 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 SKAP1Q86WV1 359 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 ANKRD13BQ86YJ7 626 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 KIAA0319LQ8IZA0 1049 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 FSTL5Q8N475 847 aaPredicted RBP4.98□□□□□ -1.61
SMC4-215ENST00000484799 MAP4K1Q92918 833 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 CINPQ9BW66 212 aaPredicted RBP4.98□□□□□ -1.61
SMC4-215ENST00000484799 C22orf23Q9BZE7 217 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 FOXP1Q9H334 677 aaPredicted RBP4.98□□□□□ -1.61
SMC4-215ENST00000484799 ARL8BQ9NVJ2 186 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 ASIC5Q9NY37 505 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 MTMR4Q9NYA4 1195 aa4.98□□□□□ -1.61
SMC4-215ENST00000484799 DNMT3BQ9UBC3 853 aaKnown RBP4.98□□□□□ -1.61
SMC4-215ENST00000484799 KRTAP29-1A8MX34 341 aaPredicted RBP4.97□□□□□ -1.61
SMC4-215ENST00000484799 GOLIM4O00461 696 aa4.97□□□□□ -1.61
SMC4-215ENST00000484799 ADAM10O14672 748 aa4.97□□□□□ -1.61
SMC4-215ENST00000484799 INSIG1O15503 277 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms