RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 INTS8Q75QN2 995 aaKnown RBP12.12□□□□□ -0.47
SCFD1-206ENST00000484733 C12orf40Q86WS4 652 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 IL17RCQ8NAC3 791 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 SLC2A14Q8TDB8 520 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 CCSER2Q9H7U1 834 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 TLR8Q9NR97 1041 aaKnown RBP12.12□□□□□ -0.47
SCFD1-206ENST00000484733 SCML2Q9UQR0 700 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 ZDHHC9Q9Y397 364 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 WDR87Q6ZQQ6 2873 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 DCLK1O15075 740 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 BEST1O76090 585 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 CCDC130P13994 396 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 PIK3CAP42336 1068 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 STPG1Q5TH74 334 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 GUF1Q8N442 669 aaKnown RBP12.12□□□□□ -0.47
SCFD1-206ENST00000484733 ZNF276Q8N554 614 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 KLF16Q9BXK1 252 aaPredicted RBP12.12□□□□□ -0.47
SCFD1-206ENST00000484733 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 ARHGEF4Q9NR80 690 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 SPHK2Q9NRA0 654 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 HHLA1C9JL84 531 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 GREM1O60565 184 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 CAVIN2O95810 425 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 FAM200BP0CF97 657 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 GTF2H1P32780 548 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 NDUFA8P51970 172 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 MAP3K7CLP57077 242 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 CCDC6Q16204 474 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 BTBD8Q5XKL5 378 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 SPOPLQ6IQ16 392 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 KLHDC10Q6PID8 442 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 TMEM92Q6UXU6 159 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 CCDC33Q8N5R6 958 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 DNAI2Q9GZS0 605 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 POLMQ9NP87 494 aaPredicted RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 HMGXB4Q9UGU5 601 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 PLXND1Q9Y4D7 1925 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 TLR5O60602 858 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 CLSTN1O94985 981 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 KLF8O95600 359 aaPredicted RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 KRT13P13646 458 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 HNRNPLP14866 589 aaKnown RBP eCLIP12.11□□□□□ -0.473e-7■■□□□ 12.7
SCFD1-206ENST00000484733 NR2F2P24468 414 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 RPL13P26373 211 aaKnown RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 PSMC2P35998 433 aaKnown RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 BYSLQ13895 437 aaKnown RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 KRBA2Q6ZNG9 492 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 TRMT11Q7Z4G4 463 aaKnown RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 BBS7Q8IWZ6 715 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 ALLCQ8N6M5 410 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 TXNDC5Q8NBS9 432 aaKnown RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 MDGA1Q8NFP4 955 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 CNTNAP3BQ96NU0 1288 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 NT5C1AQ9BXI3 368 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 CNTNAP3Q9BZ76 1288 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 SCAND2PQ9GZW5 306 aaPredicted RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 FAM124BQ9H5Z6 455 aaPredicted RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 APOBEC3GQ9HC16 384 aaKnown RBP12.11□□□□□ -0.47
SCFD1-206ENST00000484733 RXFP3Q9NSD7 469 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 STARD13Q9Y3M8 1113 aa12.11□□□□□ -0.47
SCFD1-206ENST00000484733 ANTXRLA6NF34 631 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 SGK1O00141 431 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 TIE1P35590 1138 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 P2RY2P41231 377 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 SPDYCQ5MJ68 293 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 CLEC20AQ6ZU45 233 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 SFTPA1Q8IWL2 248 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 FAM186BQ8IYM0 893 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 C12orf29Q8N999 325 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 WHAMMQ8TF30 809 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 WBP2Q969T9 261 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 CYFIP2Q96F07 1278 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 LSM14BQ9BX40 385 aaKnown RBP12.1□□□□□ -0.47
SCFD1-206ENST00000484733 TPSD1Q9BZJ3 242 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 TMEM8AQ9HCN3 771 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 MARK1Q9P0L2 795 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 DEC1Q9P2X7 70 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 ADAM23O75077 832 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 CILPO75339 1184 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 TULP3O75386 442 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 ATP5C1P36542 298 aaKnown RBP12.1□□□□□ -0.47
SCFD1-206ENST00000484733 PGFP49763 221 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 CREB5Q02930 508 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 PPP3CAQ08209 521 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 ORC1Q13415 861 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 ZCWPW2Q504Y3 356 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms