RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 GMIPQ9P107 970 aa12.63□□□□□ -0.39
SNRNP200-206ENST00000484372 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-206ENST00000484372 PCDHGA5Q9Y5G8 931 aa12.63□□□□□ -0.39
SNRNP200-206ENST00000484372 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-206ENST00000484372 ATG2BQ96BY7 2078 aa12.63□□□□□ -0.39
SNRNP200-206ENST00000484372 DMXL1Q9Y485 3027 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 FAM92AA1XBS5 289 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 TLR5O60602 858 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 EPN2O95208 641 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 KAT7O95251 611 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 SMC2O95347 1197 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 ZDHHC11BP0C7U3 371 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 TRIM49P0CI25 452 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 TRIM49CP0CI26 452 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 ATP5C1P36542 298 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 GRIA2P42262 883 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 SEC13P55735 322 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 INCA1Q0VD86 236 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 ORC1Q13415 861 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 RHBDF2Q6PJF5 856 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 C12orf29Q8N999 325 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 ELMO3Q96BJ8 720 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 ZC3H10Q96K80 434 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 SMOQ99835 787 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 DUSP9Q99956 384 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 ARRDC1-AS1Q9H2J1 176 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 CCSER2Q9H7U1 834 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 PNPLA8Q9NP80 782 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 POLMQ9NP87 494 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.62□□□□□ -0.393e-8■■■□□ 16
SNRNP200-206ENST00000484372 ARHGEF4Q9NR80 690 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 PCDHA5Q9Y5H7 936 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
SNRNP200-206ENST00000484372 HELZP42694 1942 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 TBC1D3BA6NDS4 549 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 K7EQS6 105 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 SCAMP3O14828 347 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 SLC30A4O14863 429 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 ZNF806P0C7X5 589 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 IRF1P10914 325 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 CD58P19256 250 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 ACO1P21399 889 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 GBP1P32455 592 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 TNFRSF4P43489 277 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 PSEN1P49768 467 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 MXI1P50539 228 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 SLC8A3P57103 927 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 PPP3CAQ08209 521 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 ANO4Q32M45 955 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 EOGTQ5NDL2 527 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 LY6G5CQ5SRR4 150 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 C1orf220Q5T0J3 134 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 TRMT11Q7Z4G4 463 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 KBTBD6Q86V97 674 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 TTC30AQ86WT1 665 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 ZMIZ2Q8NF64 920 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 TAS1R2Q8TE23 839 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 EZH1Q92800 747 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 JAKMIP2Q96AA8 810 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 GOLPH3LQ9H4A5 285 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 FAM124BQ9H5Z6 455 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 DEC1Q9P2X7 70 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 HMGXB4Q9UGU5 601 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 MMP17Q9ULZ9 603 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 SCML2Q9UQR0 700 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 SDK1Q7Z5N4 2213 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 DNAH14Q0VDD8 3507 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 RALGAPA1Q6GYQ0 2036 aa12.61□□□□□ -0.39
SNRNP200-206ENST00000484372 MED19A0JLT2 244 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 DCDC2BA2VCK2 349 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 CILPO75339 1184 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 BEST1O76090 585 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 RALAP11233 206 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 HOXC13P31276 330 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 TIE1P35590 1138 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 STIM1Q13586 685 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 BYSLQ13895 437 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 CRY1Q16526 586 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 PLK5Q496M5 336 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 TCERG1LQ5VWI1 586 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 ANO7Q6IWH7 933 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 CLEC20AQ6ZU45 233 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 CCDC33Q8N5R6 958 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 FBXL13Q8NEE6 735 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 KCNV2Q8TDN2 545 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 SPACA7Q96KW9 195 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 CNOT6LQ96LI5 555 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 HEXIM2Q96MH2 286 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 GBP4Q96PP9 640 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 GSDMAQ96QA5 445 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 XPO6Q96QU8 1125 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 APOBEC3GQ9HC16 384 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 SPHK2Q9NRA0 654 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 VPS45Q9NRW7 570 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 POLR3BQ9NW08 1133 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 RAB20Q9NX57 234 aa12.6□□□□□ -0.39
SNRNP200-206ENST00000484372 BCCIPQ9P287 314 aaKnown RBP eCLIP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms