RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ARNTLO00327 626 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SLC30A4O14863 429 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 PAPSS2O95340 614 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 OR4Q2P0C623 313 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 ODC1P11926 461 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 TYMPP19971 482 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SCP2P22307 547 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 TGM1P22735 817 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 CDC25AP30304 524 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 TUFMP49411 452 aaKnown RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 AARSP49588 968 aaKnown RBP eCLIP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 LIG4P49917 911 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SATB1Q01826 763 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SPAG1Q07617 926 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 FCHO2Q0JRZ9 810 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 DUSP4Q13115 394 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 MYBPC2Q14324 1141 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 INPP5AQ14642 412 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 VEPH1Q14D04 833 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 PTPAQ15257 358 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 TAF12Q16514 161 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 ARHGAP29Q52LW3 1261 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 FBXW10Q5XX13 1052 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 OVOS1Q6IE37 1185 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 CEP68Q76N32 757 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 KCNK18Q7Z418 384 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 DNAJB7Q7Z6W7 309 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 LONP2Q86WA8 852 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 RALGPS2Q86X27 583 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 ARID3BQ8IVW6 561 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 CD302Q8IX05 232 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SYT2Q8N9I0 419 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 TMEM161BQ8NDZ6 487 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 DDX1Q92499 740 aaKnown RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 GCNAQ96QF7 691 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 RPF1Q9H9Y2 349 aaKnown RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 PARD6AQ9NPB6 346 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SEMA4GQ9NTN9 838 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 THG1LQ9NWX6 298 aaKnown RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 HSFX1Q9UBD0 423 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 R3HCC1Q9Y3T6 440 aaKnown RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 TIMM13Q9Y5L4 95 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 NCOR2Q9Y618 2525 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 COL4A3Q01955 1670 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 LOC100289279A0A1B0GTE1 492 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 MYBPHLA2RUH7 354 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 MTMR11A4FU01 709 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 LACTBL1A8MY62 500 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 CHURC1-FNTBB4DL54 471 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 HNRNPDLO14979 420 aaKnown RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 OGTO15294 1046 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 MEFVO15553 781 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 ADAM11O75078 769 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 CELA2BP08218 269 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 ADRB1P08588 477 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 PLA2G4BP0C869 781 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 HOXB4P17483 251 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 GABRR2P28476 465 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 CDC25CP30307 473 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 ABCD1P33897 745 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 FNTBP49356 437 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 TOB1P50616 345 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 NCKAP1LP55160 1127 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 ZBTB6Q15916 424 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 CSRP2Q16527 193 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 MGAT5BQ3V5L5 792 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 PPM1JQ5JR12 505 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 HP1BP3Q5SSJ5 553 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 HYIQ5T013 277 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 GPR158Q5T848 1215 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 HEATR6Q6AI08 1181 aaKnown RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 MCTP1Q6DN14 999 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 IL31Q6EBC2 164 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 CENPPQ6IPU0 288 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 LRFN4Q6PJG9 635 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 HDXQ7Z353 690 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 LSRQ86X29 649 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 METTL23Q86XA0 190 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 TMC8Q8IU68 726 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 DMRTC2Q8IXT2 367 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 SYNPOQ8N3V7 929 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 DTWD1Q8N5C7 304 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 ATAD1Q8NBU5 361 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 BPIFB1Q8TDL5 484 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 PSMG2Q969U7 264 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 WDR89Q96FK6 387 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 PLPPR2Q96GM1 343 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 MRFAP1L1Q96HT8 127 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 SEPT5Q99719 369 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 MMTAG2Q9BU76 263 aaKnown RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 TASP1Q9H6P5 420 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 RBM12Q9NTZ6 932 aaKnown RBP6.34□□□□□ -1.39
CSDE1-207ENST00000483407 ZMYM5Q9UJ78 669 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 DSEQ9UL01 958 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 ODF2LQ9ULJ1 636 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 DMXL1Q9Y485 3027 aa6.34□□□□□ -1.39
CSDE1-207ENST00000483407 MYH15Q9Y2K3 1946 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms