RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ACOT1Q86TX2 421 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 MIB1Q86YT6 1006 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 SPACA7Q96KW9 195 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 CEP295NLQ96MC4 621 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 C7orf25Q9BPX7 421 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 ZSCAN16Q9H4T2 348 aaPredicted RBP14.76□□□□□ -0.05
VARS-226ENST00000483275 FAM49BQ9NUQ9 324 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 EHD2Q9NZN4 543 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 HCN2Q9UL51 889 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 NBEAQ8NFP9 2946 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 PCDH15Q96QU1 1955 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 ITPR1Q14643 2758 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 TNFRSF10BO14763 440 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 EXOC3O60645 756 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 TULP3O75386 442 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 AP1G2O75843 785 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 BEST1O76090 585 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 ALDH1A2O94788 518 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 VNN1O95497 513 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 TBX18O95935 607 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 ITPKAP23677 461 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 GRIA2P42262 883 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 PPP3CCP48454 512 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 MAP7D1Q3KQU3 841 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 C10orf76Q5T2E6 689 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 HECTD3Q5T447 861 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 UNQ6494/PRO21346Q6UXR6 183 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 UNC13DQ70J99 1090 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 GPRIN1Q7Z2K8 1008 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 TMEM25Q86YD3 366 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 ZNF513Q8N8E2 541 aaPredicted RBP14.75□□□□□ -0.05
VARS-226ENST00000483275 IQUBQ8NA54 791 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 ZMIZ2Q8NF64 920 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 OR2I1PQ8NGU4 316 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 CCDC26Q8TAB7 109 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 SMOQ99835 787 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 CUEDC2Q9H467 287 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 DMAP1Q9NPF5 467 aaPredicted RBP14.75□□□□□ -0.05
VARS-226ENST00000483275 CD93Q9NPY3 652 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 WASF3Q9UPY6 502 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 SH3BP1Q9Y3L3 701 aa14.75□□□□□ -0.05
VARS-226ENST00000483275 PCNX2A6NKB5 2137 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 E2F8A0AVK6 867 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 TBC1D3BA6NDS4 549 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 CUTAO60888 179 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 RTN3O95197 1032 aaPredicted RBP14.74□□□□□ -0.05
VARS-226ENST00000483275 CFIP05156 583 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 PROS1P07225 676 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 ENGP17813 658 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 EIF2DP41214 584 aaKnown RBP14.74□□□□□ -0.05
VARS-226ENST00000483275 DLG4P78352 724 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 NCOA4Q13772 614 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 ZNF667Q5HYK9 610 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 EOGTQ5NDL2 527 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 LYSMD4Q5XG99 296 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 EGFLAMQ63HQ2 1017 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 SPOPLQ6IQ16 392 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 C11orf74Q86VG3 221 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 DDX42Q86XP3 938 aaKnown RBP eCLIP14.74□□□□□ -0.05
VARS-226ENST00000483275 ETFBKMTQ8IXQ9 262 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 FUKQ8N0W3 1084 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 BHMTQ93088 406 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 SYAP1Q96A49 352 aaPredicted RBP14.74□□□□□ -0.05
VARS-226ENST00000483275 INTS4Q96HW7 963 aaKnown RBP14.74□□□□□ -0.05
VARS-226ENST00000483275 ACOX2Q99424 681 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 LRRC27Q9C0I9 530 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 NACA2Q9H009 215 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 SLC6A17Q9H1V8 727 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 POLMQ9NP87 494 aaPredicted RBP14.74□□□□□ -0.05
VARS-226ENST00000483275 CALCOCO1Q9P1Z2 691 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 ZMIZ1Q9ULJ6 1067 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 FREM2Q5SZK8 3169 aa14.74□□□□□ -0.05
VARS-226ENST00000483275 ANKRD11Q6UB99 2663 aaPredicted RBP14.74□□□□□ -0.05
VARS-226ENST00000483275 ATP8B3O60423 1300 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 SPAARA0A1B0GVQ0 90 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 NEDD8-MDP1E9PL57 170 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 K7ELQ4 463 aaPredicted RBP14.73□□□□□ -0.05
VARS-226ENST00000483275 MDM4O15151 490 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 CYP26A1O43174 497 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 PPP6R2O75170 966 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 STAU1O95793 577 aaKnown RBP14.73□□□□□ -0.05
VARS-226ENST00000483275 GABRG2P18507 467 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 ADORA2BP29275 332 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 MAP3K7CLP57077 242 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 AMPD3Q01432 767 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 BMT2Q1RMZ1 405 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 CNNM4Q6P4Q7 775 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 C12orf29Q8N999 325 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 TERB1Q8NA31 727 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 PDZD8Q8NEN9 1154 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 SLC2A14Q8TDB8 520 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 SMARCD1Q96GM5 515 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 ZNF396Q96N95 335 aaPredicted RBP14.73□□□□□ -0.05
VARS-226ENST00000483275 GTPBP2Q9BX10 602 aaKnown RBP14.73□□□□□ -0.05
VARS-226ENST00000483275 DNAJC17Q9NVM6 304 aaKnown RBP14.73□□□□□ -0.05
VARS-226ENST00000483275 TBC1D14Q9P2M4 693 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 NUDT5Q9UKK9 219 aa14.73□□□□□ -0.05
VARS-226ENST00000483275 ATRXP46100 2492 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms