RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 NSL1Q96IY1 281 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 REEP2Q9BRK0 252 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 ZNF70Q9UC06 446 aaPredicted RBP13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 NDUFB10O96000 172 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 FCGR1AP12314 374 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 CNTFP26441 200 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 COPAP53621 1224 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 KYNUQ16719 465 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 TTC33Q6PID6 262 aaPredicted RBP13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 ADGRA1Q86SQ6 560 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 ADGRE3Q9BY15 652 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 KIF1CO43896 1103 aaKnown RBP13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 CST8O60676 142 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 RBP1P09455 135 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 ALFQ53S48 1182 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 ABI2Q9NYB9 513 aaPredicted RBP13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 GTF2A1LQ9UNN4 478 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 E7ENQ6 273 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 THRAP10827 490 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 ARMCX4Q5H9R4 360 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 HLA-DQA1Q5Y7H0 255 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 RFX8Q6ZV50 586 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 ZNF513Q8N8E2 541 aaPredicted RBP13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 THTPAQ9BU02 230 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 NDUFA13Q9P0J0 144 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
CACNA1D-206ENST00000481478 E9PBE3 544 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 ZNF24P17028 368 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 ATP6V1C1P21283 382 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 GNA13Q14344 377 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 PLCL1Q15111 1095 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 NFKBIZQ9BYH8 718 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 KLHL31Q9H511 634 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 B2RBV5 119 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 TM9SF1O15321 606 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 KCNA3P22001 575 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 HUNKP57058 714 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 CNGA2Q16280 664 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 RAD9BQ6WBX8 426 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 RIN3Q8TB24 985 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 ADI1Q9BV57 179 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 CNOT3O75175 753 aaKnown RBP13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 GYPCP04921 128 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 TGM2P21980 687 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 MMRN1Q13201 1228 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 MAD2L1Q13257 205 aaPredicted RBP13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 LRP10Q7Z4F1 713 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 VMP1Q96GC9 406 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 CAPN10Q9HC96 672 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 KLHL20Q9Y2M5 609 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 RPN2P04844 631 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 SSTR3P32745 418 aaPredicted RBP13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 PRPF39Q86UA1 669 aaKnown RBP13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 JAMLQ86YT9 394 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 ZNF557Q8N988 423 aaPredicted RBP13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 DPP3Q9NY33 737 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 STK4Q13043 487 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 PKN1Q16512 942 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 MDH1BQ5I0G3 518 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 NEK10Q6ZWH5 1172 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 PNKPQ96T60 521 aa13.39□□□□□ -0.27
CACNA1D-206ENST00000481478 GCLCP48506 637 aaPredicted RBP13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 ATAD3BQ5T9A4 648 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 ZNF614Q8N883 585 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 CENPTQ96BT3 561 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 RMND5BQ96G75 393 aaPredicted RBP13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 CHP1Q99653 195 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 FAM220BPB1ANY3 271 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 VDRP11473 427 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 GTF2H1P32780 548 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 CHI3L2Q15782 390 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 ZNF280DQ6N043 979 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 C4orf33Q8N1A6 199 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 BLOC1S5Q8TDH9 187 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 POLD4Q9HCU8 107 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 MAGEA10P43363 369 aaPredicted RBP13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 TMED10P49755 219 aaKnown RBP13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 ACTN3Q08043 901 aaPredicted RBP13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 LONRF1Q17RB8 773 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 DNAJC9Q8WXX5 260 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 REPS1Q96D71 796 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 TMEM237Q96Q45 408 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 MCCC1Q96RQ3 725 aaPredicted RBP13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 ZNF518BQ9C0D4 1074 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 EFCAB1Q9HAE3 211 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 PDGFCQ9NRA1 345 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 PRR12Q9ULL5 1215 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 PLA2G4CQ9UP65 541 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 TOPAZ1Q8N9V7 1692 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 A0A088AWK7 358 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms