RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 RNF135Q8IUD6 432 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 GLYCTKQ8IVS8 523 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 TMEM130Q8N3G9 435 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 SYNPOQ8N3V7 929 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 CPXM2Q8N436 756 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 C12orf76Q8N812 135 aaPredicted RBP5.35□□□□□ -1.55
HDAC6-223ENST00000480525 KCNV2Q8TDN2 545 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 PPM1EQ8WY54 764 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 TFAP2BQ92481 460 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 NT5C3BQ969T7 300 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 PLD4Q96BZ4 506 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 SHDQ96IW2 340 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 CALR3Q96L12 384 aaKnown RBP5.35□□□□□ -1.55
HDAC6-223ENST00000480525 MYADMQ96S97 322 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 KCNK16Q96T55 309 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 DNAJC7Q99615 494 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 NCAPGQ9BPX3 1015 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 FAM83CQ9BQN1 747 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 ZSWIM1Q9BR11 485 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 CRACR2AQ9BSW2 395 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 MED10Q9BTT4 135 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 SLC46A2Q9BY10 475 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 DCLK3Q9C098 648 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 VPS16Q9H269 839 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 MMRN2Q9H8L6 949 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 LRRC4Q9HBW1 653 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 ZNF334Q9HCZ1 680 aaPredicted RBP5.35□□□□□ -1.55
HDAC6-223ENST00000480525 PRDM6Q9NQX0 595 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 FAM49BQ9NUQ9 324 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.35□□□□□ -1.55
HDAC6-223ENST00000480525 THG1LQ9NWX6 298 aaKnown RBP5.35□□□□□ -1.55
HDAC6-223ENST00000480525 TAB2Q9NYJ8 693 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 MARK1Q9P0L2 795 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 SLC27A5Q9Y2P5 690 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 HBS1LQ9Y450 684 aaKnown RBP5.35□□□□□ -1.55
HDAC6-223ENST00000480525 PAXBP1Q9Y5B6 917 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 FHOD1Q9Y613 1164 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 MYOFQ9NZM1 2061 aa5.35□□□□□ -1.55
HDAC6-223ENST00000480525 A0A0A0MRY4 1105 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 PRR33A8MZF0 331 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 EIF3CLB5ME19 914 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 RBAK-RBAKDNI3L0D1 243 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 M0QYV0 167 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 MAN2B1O00754 1011 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CYP26A1O43174 497 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 IRAK2O43187 625 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 HCRTO43612 131 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 TLR5O60602 858 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 BEST1O76090 585 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 IGLV3-25P01717 112 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 MYBL1P10243 752 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 SLC2A3P11169 496 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 KRT5P13647 590 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CD19P15391 556 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CEBPBP17676 345 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 HDCP19113 662 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 FECHP22830 423 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CDC25BP30305 580 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 GBP2P32456 591 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 KRT9P35527 623 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CHKAP35790 457 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ATP5C1P36542 298 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 RPS9P46781 194 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CLCN5P51795 746 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 TKTL1P51854 596 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 MAP3K7CLP57077 242 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 POLR2FP61218 127 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 USP46P62068 366 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 YWHAZP63104 245 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 NOMO3P69849 1222 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ZXDAP98168 799 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 C1QBPQ07021 282 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ACAP1Q15027 740 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 TEAD2Q15562 447 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 GOLGA7BQ2TAP0 167 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 HSF5Q4G112 596 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 FAM78AQ5JUQ0 283 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 NUGGCQ68CJ6 796 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 PMF1Q6P1K2 205 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 EP400NLQ6ZTU2 488 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 HTR3DQ70Z44 454 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 RRAGAQ7L523 313 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 GET4Q7L5D6 327 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CACNA2D4Q7Z3S7 1137 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 BNIPLQ7Z465 357 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 IRF2BP2Q7Z5L9 587 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 CNGA4Q8IV77 575 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ARID3BQ8IVW6 561 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 VSTM4Q8IW00 320 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 SCN4BQ8IWT1 228 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 SIX6OS1Q8N1H7 587 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 SLC44A3Q8N4M1 653 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ITFG1Q8TB96 612 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 ZSCAN18Q8TBC5 510 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 BPIFB1Q8TDL5 484 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 IPO4Q8TEX9 1081 aaKnown RBP5.34□□□□□ -1.55
HDAC6-223ENST00000480525 FNIP1Q8TF40 1166 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 OSCP1Q8WVF1 389 aa5.34□□□□□ -1.55
HDAC6-223ENST00000480525 GOLGA1Q92805 767 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms