RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 NMUR1Q9HB89 426 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 SH3BP1Q9Y3L3 701 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 ATP6V1DQ9Y5K8 247 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 HHLA1C9JL84 531 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 ADH5P11766 374 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 ACO1P21399 889 aaKnown RBP18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 PPP3CCP48454 512 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 LMNB2Q03252 620 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 DCAF17Q5H9S7 520 aaPredicted RBP18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 PPP1R26Q5T8A7 1209 aaPredicted RBP18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 ANO7Q6IWH7 933 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 TMEM92Q6UXU6 159 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 FMR1NBQ8N0W7 255 aaPredicted RBP18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 ALLCQ8N6M5 410 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 TMEM174Q8WUU8 243 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 TAF4BQ92750 862 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 IMPG2Q9BZV3 1241 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 NIF3L1Q9GZT8 377 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 IL37Q9NZH6 218 aa18.38■□□□□ 0.53
ECHDC1-216ENST00000479525 CACNA1AO00555 2505 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 A0A1W2PQH9 124 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 TLR5O60602 858 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 KLF8O95600 359 aaPredicted RBP18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 ZDHHC11BP0C7U3 371 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 PFKLP17858 780 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 CNR2P34972 360 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 INCA1Q0VD86 236 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 NFIL3Q16649 462 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 ANO4Q32M45 955 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 FBXO43Q4G163 708 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 TCERG1LQ5VWI1 586 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 TCEAL6Q6IPX3 200 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 SYT13Q7L8C5 426 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 UNC93AQ86WB7 457 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 BHMTQ93088 406 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 TCEAL3Q969E4 200 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 NT5C1AQ9BXI3 368 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 TMEM8AQ9HCN3 771 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 CSNK1G1Q9HCP0 422 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 ARHGEF4Q9NR80 690 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 SPTBN2O15020 2390 aa18.37■□□□□ 0.53
ECHDC1-216ENST00000479525 MAPK13O15264 365 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 CILPO75339 1184 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 KAT7O95251 611 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 APBB3O95704 486 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 BCKDHBP21953 392 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 HOXA6P31267 233 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 WASP42768 502 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 MXI1P50539 228 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 CBWD6Q4V339 395 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 CBWD3Q5JTY5 395 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 CBWD5Q5RIA9 395 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 TPGS1Q6ZTW0 290 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 CACNA2D4Q7Z3S7 1137 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 TMEM25Q86YD3 366 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 GPR161Q8N6U8 529 aaKnown RBP18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 FRMD1Q8N878 549 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 TXNDC5Q8NBS9 432 aaKnown RBP18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 TSTD1Q8NFU3 115 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 OVCA2Q8WZ82 227 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 ACDQ96AP0 544 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 PNKPQ96T60 521 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 HNRNPABQ99729 332 aaKnown RBP18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 ADAMTS9Q9P2N4 1935 aa18.36■□□□□ 0.53
ECHDC1-216ENST00000479525 TNRC6BQ9UPQ9 1833 aaKnown RBP18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 SGK1O00141 431 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 APODP05090 189 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 HMBSP08397 361 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 RPL13P26373 211 aaKnown RBP18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 GBP1P32455 592 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 LRMPQ12912 555 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 CSRP2Q16527 193 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 PLK5Q496M5 336 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 KRT39Q6A163 491 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 ANKRD40Q6AI12 368 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 RLN3Q8WXF3 142 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 EXOC4Q96A65 974 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 DUSP15Q9H1R2 295 aaPredicted RBP18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 TLR8Q9NR97 1041 aaKnown RBP18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 PCDHA5Q9Y5H7 936 aa18.35■□□□□ 0.53
ECHDC1-216ENST00000479525 E2F8A0AVK6 867 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 FAM92AA1XBS5 289 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 GOLGA6L4A6NEF3 574 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 SLC9A3R1O14745 358 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 ADH1CP00326 375 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 EPB41P11171 864 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 AASDHQ4L235 1098 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 SNX30Q5VWJ9 437 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 DDX42Q86XP3 938 aaKnown RBP eCLIP18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 CAMKK1Q8N5S9 505 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 IL17RCQ8NAC3 791 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 ENGASEQ8NFI3 743 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 MDGA1Q8NFP4 955 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 NDRG1Q92597 394 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 P2RY11Q96G91 374 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 HEXIM2Q96MH2 286 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 KLF16Q9BXK1 252 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 CYP3A43Q9HB55 503 aa18.34■□□□□ 0.53
ECHDC1-216ENST00000479525 SPHK2Q9NRA0 654 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms