RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 IPMKQ8NFU5 416 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 RAET1EQ8TD07 263 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 RMDN1Q96DB5 314 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 NAT9Q9BTE0 207 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 EIF2AQ9BY44 585 aaKnown RBP14.84□□□□□ -0.03
COL20A1-206ENST00000479501 CDT1Q9H211 546 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 MRPL40Q9NQ50 206 aaKnown RBP14.84□□□□□ -0.03
COL20A1-206ENST00000479501 UBA6A0AVT1 1052 aaPredicted RBP14.84□□□□□ -0.03
COL20A1-206ENST00000479501 THPOP40225 353 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 YWHAHQ04917 246 aaPredicted RBP14.84□□□□□ -0.03
COL20A1-206ENST00000479501 SPIRE1Q08AE8 756 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 PPIL2Q13356 520 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 TRIP10Q15642 601 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 CHI3L2Q15782 390 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 MDH1BQ5I0G3 518 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 TMTC4Q5T4D3 741 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 NAIF1Q69YI7 327 aaPredicted RBP14.84□□□□□ -0.03
COL20A1-206ENST00000479501 SLC26A11Q86WA9 606 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 BSNDQ8WZ55 320 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 GFM2Q969S9 779 aaKnown RBP14.84□□□□□ -0.03
COL20A1-206ENST00000479501 TRIM15Q9C019 465 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 A0A0B4J269 797 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 SDR42E2A6NKP2 422 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 THP07101 528 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 UBTFL6P0CB48 400 aaPredicted RBP14.84□□□□□ -0.03
COL20A1-206ENST00000479501 JAM2P57087 298 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 SLC20A2Q08357 652 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 LRRC38Q5VT99 294 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 PLPPR4Q7Z2D5 763 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 ZNF410Q86VK4 478 aa14.84□□□□□ -0.03
COL20A1-206ENST00000479501 PHF13Q86YI8 300 aaPredicted RBP14.84□□□□□ -0.03
COL20A1-206ENST00000479501 BAZ2AQ9UIF9 1905 aaKnown RBP14.83□□□□□ -0.03
COL20A1-206ENST00000479501 E2F8A0AVK6 867 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 SIGLEC16A6NMB1 481 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 FSCN2O14926 492 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 ASS1P00966 412 aaKnown RBP14.83□□□□□ -0.04
COL20A1-206ENST00000479501 HMBSP08397 361 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 ODC1P11926 461 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 CYP2F1P24903 491 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 SSTR1P30872 391 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 OR1G1P47890 313 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 PALB2Q86YC2 1186 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 CCNJLQ8IV13 435 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 TASP1Q9H6P5 420 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 SUN2Q9UH99 717 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 PRG3Q9Y2Y8 225 aaPredicted RBP14.83□□□□□ -0.04
COL20A1-206ENST00000479501 E5RJQ4 531 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 ZSCAN5DPP0CG00 497 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 KCNA2P16389 499 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 VHLP40337 213 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 RPL7AP62424 266 aaKnown RBP14.83□□□□□ -0.04
COL20A1-206ENST00000479501 SUGP1Q8IWZ8 645 aaKnown RBP14.83□□□□□ -0.04
COL20A1-206ENST00000479501 RASGEF1CQ8N431 466 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 ROBO1Q9Y6N7 1651 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 GPR182O15218 404 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 ELK3P41970 407 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 NSUN2Q08J23 767 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL20A1-206ENST00000479501 CNGA2Q16280 664 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 ERMARDQ5T6L9 678 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 GCNAQ96QF7 691 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 BCAS3Q9H6U6 928 aa14.83□□□□□ -0.04
COL20A1-206ENST00000479501 APOC4-APOC2K7ER74 178 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 ZNF862O60290 1169 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 SUPT3HO75486 399 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 APOC2P02655 101 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 NFICP08651 508 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 PAN2Q504Q3 1202 aaKnown RBP14.82□□□□□ -0.04
COL20A1-206ENST00000479501 EEF1DP3Q658K8 133 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 LRRC57Q8N9N7 239 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 PCDHA2Q9Y5H9 948 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 MROH7Q68CQ1 1323 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 SNX2O60749 519 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 SHBGP04278 402 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 YY1P25490 414 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 PCSK7Q16549 785 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 NLRP9Q7RTR0 991 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 ZCCHC9Q8N567 271 aaKnown RBP14.82□□□□□ -0.04
COL20A1-206ENST00000479501 SARS2Q9NP81 518 aaKnown RBP14.82□□□□□ -0.04
COL20A1-206ENST00000479501 ARHGAP28Q9P2N2 729 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 SNX5Q9Y5X3 404 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 MAN1A2O60476 641 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 FARP2O94887 1054 aaPredicted RBP14.82□□□□□ -0.04
COL20A1-206ENST00000479501 KDELR1P24390 212 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 MAP3K7CLP57077 242 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 ACVR2BQ13705 512 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 DAB2IPQ5VWQ8 1189 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 LBX2Q6XYB7 198 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 HELQQ8TDG4 1101 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 SYCE1LA8MT33 242 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 TGM2P21980 687 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 KCTD19Q17RG1 926 aaPredicted RBP14.82□□□□□ -0.04
COL20A1-206ENST00000479501 ASTE1Q2TB18 679 aaPredicted RBP14.82□□□□□ -0.04
COL20A1-206ENST00000479501 ZDHHC17Q8IUH5 632 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 KIAA0319LQ8IZA0 1049 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 CATSPER1Q8NEC5 780 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 NSMCE4AQ9NXX6 385 aa14.82□□□□□ -0.04
COL20A1-206ENST00000479501 ABI2Q9NYB9 513 aaPredicted RBP14.82□□□□□ -0.04
COL20A1-206ENST00000479501 SAE1Q9UBE0 346 aaPredicted RBP14.82□□□□□ -0.04
COL20A1-206ENST00000479501 ONECUT3O60422 494 aaPredicted RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 FBXO21O94952 628 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms