RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 STX7O15400 261 aaKnown RBP14.71□□□□□ -0.06
NPHP4-208ENST00000478423 B4GALT5O43286 388 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 PYGLP06737 847 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 GEMP55040 296 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 PTK6Q13882 451 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 CAPRIN1Q14444 709 aaKnown RBP14.71□□□□□ -0.06
NPHP4-208ENST00000478423 HIC1Q14526 733 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 SZRD1Q7Z422 152 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 TMC3Q7Z5M5 1100 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 DDX53Q86TM3 631 aaKnown RBP14.71□□□□□ -0.06
NPHP4-208ENST00000478423 ZC3H15Q8WU90 426 aaKnown RBP14.71□□□□□ -0.06
NPHP4-208ENST00000478423 ACO2Q99798 780 aaKnown RBP14.71□□□□□ -0.06
NPHP4-208ENST00000478423 TRIM15Q9C019 465 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 LRRC40Q9H9A6 602 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 MRPL40Q9NQ50 206 aaKnown RBP14.71□□□□□ -0.06
NPHP4-208ENST00000478423 UBP1Q9NZI7 540 aa14.71□□□□□ -0.06
NPHP4-208ENST00000478423 RNF103-CHMP3A0A140T963 221 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 LOC100653049A0A140TA62 436 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 F5H5T6 163 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 ZNF197O14709 1029 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 KRT34O76011 436 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 ESRRBO95718 433 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 RFC1P35251 1148 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-208ENST00000478423 RAB27AP51159 221 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 NCKAP1LP55160 1127 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 PDGFCQ9NRA1 345 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 AAR2Q9Y312 384 aaKnown RBP14.7□□□□□ -0.06
NPHP4-208ENST00000478423 TTC36A6NLP5 189 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 H0Y626 953 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 KCNK1O00180 336 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 E2F6O75461 281 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 PGK1P00558 417 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 HIST1H2AGP0C0S8 130 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-208ENST00000478423 PECAM1P16284 738 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-208ENST00000478423 HIST1H2ADP20671 130 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 RAD23BP54727 409 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 AP2B1P63010 937 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 FMO1Q01740 532 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 RBBP7Q16576 425 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 PTRHD1Q6GMV3 140 aaKnown RBP14.7□□□□□ -0.06
NPHP4-208ENST00000478423 DENND1BQ6P3S1 775 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 HIST1H2AHQ96KK5 128 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 HIST1H2AJQ99878 128 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 H2AFJQ9BTM1 129 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 IRAK4Q9NWZ3 460 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 CHRM3P20309 590 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 AMPD1P23109 780 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 HMOX2P30519 316 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 MAPRE2Q15555 327 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 FBXW10Q5XX13 1052 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 ABHD15Q6UXT9 468 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 DEFB128Q7Z7B8 93 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 LRRC43Q8N309 656 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 KIF2BQ8N4N8 673 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 TTC30BQ8N4P2 665 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 N4BP2L2Q92802 583 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-208ENST00000478423 CELF6Q96J87 481 aaKnown RBP14.7□□□□□ -0.06
NPHP4-208ENST00000478423 SENP8Q96LD8 212 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 PGLYRP2Q96PD5 576 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 NDE1Q9NXR1 346 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 COL20A1Q9P218 1284 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 H7C4K7 107 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 SLC6A3Q01959 620 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 CNGA2Q16280 664 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 GPR142Q7Z601 462 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 ZDHHC17Q8IUH5 632 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 COLGALT1Q8NBJ5 622 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 PBXIP1Q96AQ6 731 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 SH3KBP1Q96B97 665 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 ADAM2Q99965 735 aa14.7□□□□□ -0.06
NPHP4-208ENST00000478423 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 DNALI1O14645 258 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 PEX10O60683 326 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 SASH3O75995 380 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 FARP2O94887 1054 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 LRG1P02750 347 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 TRADDQ15628 312 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 SLC26A11Q86WA9 606 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 PPP2R3CQ969Q6 453 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 CINPQ9BW66 212 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 TRPM5Q9NZQ8 1165 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 NAALADL1Q9UQQ1 740 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 MTO1Q9Y2Z2 717 aaKnown RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 REXO2Q9Y3B8 237 aaKnown RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 LMO7Q8WWI1 1683 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 HNRNPCL1O60812 293 aaKnown RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 ASMTLO95671 621 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 ENO3P13929 434 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 CCDC130P13994 396 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 CCR1P32246 355 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 MARSP56192 900 aaKnown RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 ELAVL2Q12926 359 aaKnown RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 ARHGEF7Q14155 803 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 ZRANB3Q5FWF4 1079 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 TRPV2Q9Y5S1 764 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 IGLV3-22A0A075B6J6 115 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 B2RBV5 119 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 C6orf10Q5SRN2 563 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 NUDT18Q6ZVK8 323 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 YAF2Q8IY57 180 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms