RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 TIMP4Q99727 224 aa4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 GDF15Q99988 308 aa4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 PCDHAC1Q9H158 963 aa4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 RIOX1Q9H6W3 641 aa4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 NKX1-2Q9UD57 310 aaPredicted RBP4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 STEAP1Q9UHE8 339 aa4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 VPS51Q9UID3 782 aa4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 ZMYND8Q9ULU4 1186 aaPredicted RBP4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 ADAMTS5Q9UNA0 930 aa4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 LRCH1Q9Y2L9 728 aa4.65□□□□□ -1.67
SMARCA1-204ENST00000478420 FAM234BA2RU67 622 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 M0R3H8 397 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 AGPSO00116 658 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 AP4M1O00189 453 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 PODXLO00592 558 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 CES2O00748 559 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 PLA2G6O60733 806 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 PMPCBO75439 489 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 NUDT3O95989 172 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 WT1P19544 449 aaPredicted RBP4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 GPD1P21695 349 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 BMP5P22003 454 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 GABRB3P28472 473 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 PPM1AP35813 382 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 TECP42680 631 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 E2F1Q01094 437 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 GPS1Q13098 491 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 MORC3Q14149 939 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 STARD3Q14849 445 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 PCID2Q5JVF3 399 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 C1orf228Q6PIY5 440 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 KIAA0408Q6ZU52 694 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 SLC29A4Q7RTT9 530 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 SKAP1Q86WV1 359 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 FSTL5Q8N475 847 aaPredicted RBP4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 C11orf44Q8N8P7 122 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 GLIS1Q8NBF1 620 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 NGDNQ8NEJ9 315 aaKnown RBP4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 MBD3L2Q8NHZ7 208 aaPredicted RBP4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 CYP2W1Q8TAV3 490 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 ABHD5Q8WTS1 349 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 PRR25Q96S07 402 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 RPS6KC1Q96S38 1066 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 SELENOOQ9BVL4 669 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 FSD1LQ9BXM9 530 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 STK33Q9BYT3 514 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 KLK15Q9H2R5 256 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 PLCB1Q9NQ66 1216 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 TM7SF3Q9NS93 570 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 ASB6Q9NWX5 421 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 RGL1Q9NZL6 768 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 CDC23Q9UJX2 597 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 RIMKLBQ9ULI2 386 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 SLC27A6Q9Y2P4 619 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 DAAM1Q9Y4D1 1078 aa4.64□□□□□ -1.67
SMARCA1-204ENST00000478420 ABHD14A-ACY1A0A1B0GW23 586 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 ADAMTS3O15072 1205 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 PEX14O75381 377 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 CREB1P16220 341 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 EGR1P18146 543 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 YY1P25490 414 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 MST1P26927 711 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 ITPKBP27987 946 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 SLC5A2P31639 672 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 CLK3P49761 638 aaKnown RBP4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 CLCA4Q14CN2 919 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 MAPKAPK3Q16644 382 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 ST3GAL2Q16842 350 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 SLC5A9Q2M3M2 681 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 ZNF362Q5T0B9 420 aaPredicted RBP4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 L1TD1Q5T7N2 865 aaKnown RBP4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 RAP1GAP2Q684P5 730 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 DENND2CQ68D51 928 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 CEP85Q6P2H3 762 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 USP49Q70CQ1 688 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 ARHGEF25Q86VW2 580 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 SPICE1Q8N0Z3 855 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 TMEM41AQ96HV5 264 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 VPS50Q96JG6 964 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 BBC3Q96PG8 261 aaPredicted RBP4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 NECTIN3Q9NQS3 549 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 SEMA4GQ9NTN9 838 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 TAGLN3Q9UI15 199 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 AMFRQ9UKV5 643 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 SLC39A10Q9ULF5 831 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 MAGED2Q9UNF1 606 aaPredicted RBP4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 COL15A1P39059 1388 aa4.63□□□□□ -1.67
SMARCA1-204ENST00000478420 TMPRSS11DO60235 418 aa4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 HNRNPCP07910 306 aaKnown RBP eCLIP4.62□□□□□ -1.673e-7■■■□□ 19.2
SMARCA1-204ENST00000478420 ARP10275 920 aa4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 MYCLP12524 364 aaPredicted RBP4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 PTH2RP49190 550 aa4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 ELLP55199 621 aaPredicted RBP4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 EIF4A1P60842 406 aaKnown RBP4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 NSUN2Q08J23 767 aaKnown RBP eCLIP4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 RAB30Q15771 203 aa4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 ARL6IP4Q66PJ3 421 aaKnown RBP4.62□□□□□ -1.67
SMARCA1-204ENST00000478420 ABLIM2Q6H8Q1 611 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms