RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 OBSL1O75147 1896 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 K7EQS6 105 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 TNFRSF10BO14763 440 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 HOXC11O43248 304 aaPredicted RBP15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 CCDC130P13994 396 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 GTF2H1P32780 548 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 ASPAP45381 313 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 PSEN1P49768 467 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 NDUFA8P51970 172 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 SLC8A3P57103 927 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 DLG4P78352 724 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 ZXDBP98169 803 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 CREB5Q02930 508 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 INCA1Q0VD86 236 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 CRY1Q16526 586 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 LY6G5CQ5SRR4 150 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 ANO7Q6IWH7 933 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 RASSF3Q86WH2 238 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 SCAMP5Q8TAC9 235 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 EZH1Q92800 747 aaPredicted RBP15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 FAM49BQ9NUQ9 324 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 BCCIPQ9P287 314 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 DEC1Q9P2X7 70 aa15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 CHORDC1Q9UHD1 332 aaPredicted RBP15.27■□□□□ 0.04
SMARCE1-209ENST00000478349 TBC1D3BA6NDS4 549 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 ADRB1P08588 477 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 ZDHHC11BP0C7U3 371 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 ADORA2BP29275 332 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 ATP5C1P36542 298 aaKnown RBP15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 MAP3K7CLP57077 242 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 DPYDQ12882 1025 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 SF3A2Q15428 464 aaKnown RBP15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 ANO4Q32M45 955 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 EDRF1Q3B7T1 1238 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 PLA2G2CQ5R387 149 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 RHBDF2Q6PJF5 856 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 KRBA2Q6ZNG9 492 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 TTC30AQ86WT1 665 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 XPO6Q96QU8 1125 aaKnown RBP15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 HNRNPABQ99729 332 aaKnown RBP15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 SMOQ99835 787 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 SDCBP2Q9H190 292 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 DUSP15Q9H1R2 295 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 TMEM8AQ9HCN3 771 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 SPHK2Q9NRA0 654 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 SCML2Q9UQR0 700 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 DCHS1Q96JQ0 3298 aa15.26■□□□□ 0.03
SMARCE1-209ENST00000478349 DENND4CQ5VZ89 1909 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 GOLGA6L4A6NEF3 574 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 KLF8O95600 359 aaPredicted RBP15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 CAVIN2O95810 425 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 EPB41P11171 864 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 GCLMP48507 274 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 KDSRQ06136 332 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 ADAM9Q13443 819 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 E2F5Q15329 346 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 PMS2CLQ68D20 193 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 RNF43Q68DV7 783 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 KRT39Q6A163 491 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 SDE2Q6IQ49 451 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 KLHDC10Q6PID8 442 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 PAQR9Q6ZVX9 377 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 CYP2U1Q7Z449 544 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 CCDC33Q8N5R6 958 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 ALLCQ8N6M5 410 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 TXNDC5Q8NBS9 432 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 CYFIP2Q96F07 1278 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 ZFRQ96KR1 1074 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 TSG101Q99816 390 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 TPSD1Q9BZJ3 242 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 CYLDQ9NQC7 956 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 WDR35Q9P2L0 1181 aa15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 HOOK1Q9UJC3 728 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 CIZ1Q9ULV3 898 aaPredicted RBP15.25■□□□□ 0.03
SMARCE1-209ENST00000478349 A0A0A0MRY4 1105 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 BCLAF3A2AJT9 711 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 SCAMP3O14828 347 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 CETN3O15182 167 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 MAP3K13O43283 966 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 GDF9O60383 454 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 TRIM49P0CI25 452 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 TRIM49CP0CI26 452 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 IRF1P10914 325 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 RALAP11233 206 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 ACO1P21399 889 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 TIE1P35590 1138 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 MXI1P50539 228 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 GAB4Q2WGN9 574 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 C10orf76Q5T2E6 689 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 STPG1Q5TH74 334 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 DAB2IPQ5VWQ8 1189 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 GRAMD4Q6IC98 578 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 SPOPLQ6IQ16 392 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 CLEC20AQ6ZU45 233 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 LPCAT2Q7L5N7 544 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 BBS7Q8IWZ6 715 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 ARHGAP18Q8N392 663 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 ZNF513Q8N8E2 541 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms