RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 SCAMP3O14828 347 aaKnown RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 LTFP02788 710 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 SLC2A3P11169 496 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ATP4AP20648 1035 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 RAD51Q06609 339 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 NR1H3Q13133 447 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ANO4Q32M45 955 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 FAM183BPQ6ZVS7 135 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 SAPCD2Q86UD0 394 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 TTC30AQ86WT1 665 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 TMEM86AQ8N2M4 240 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ALG3Q92685 438 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 DDX50Q9BQ39 737 aaKnown RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 AJAP1Q9UKB5 411 aaPredicted RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 CLGNO14967 610 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 KITP10721 976 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 NPR3P17342 541 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 SLC11A2P49281 568 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 GRB14Q14449 540 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 TAS2R42Q7RTR8 314 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ARHGAP18Q8N392 663 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 LRRC52Q8N7C0 313 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 RUBCNQ92622 972 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ALKBH8Q96BT7 664 aaKnown RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 PABPC3Q9H361 631 aaKnown RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 SEMA4AQ9H3S1 761 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 PCDHB12Q9Y5F1 795 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 RAB44Q7Z6P3 723 aaPredicted RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 RASAL3Q86YV0 1011 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ANKRD52Q8NB46 1076 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 MRPS31Q92665 395 aaKnown RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ZNF669Q96BR6 464 aaPredicted RBP12.3□□□□□ -0.44
SGSM3-209ENST00000478085 ELOVL4Q9GZR5 314 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 SLC27A5Q9Y2P5 690 aa12.3□□□□□ -0.44
SGSM3-209ENST00000478085 A0A1B0GUA9 196 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 CYP1A2P05177 515 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 ZSCAN5DPP0CG00 497 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 CCR1P32246 355 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 SLC12A1Q13621 1099 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 KLC3Q6P597 504 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 JOSD2Q8TAC2 188 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 PCYT2Q99447 389 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 PIH1D1Q9NWS0 290 aaKnown RBP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 GMNCA6NCL1 334 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 UNCXA6NJT0 531 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 H0Y626 953 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 GMNNO75496 209 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 FAM153BP0C7A2 387 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 COPS2P61201 443 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 FAM153CQ494X1 144 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 PTPN20Q4JDL3 420 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 CPXM1Q96SM3 734 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 CACNG4Q9UBN1 327 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 FAM153AQ9UHL3 310 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 GIT1Q9Y2X7 761 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 PRRC2BQ5JSZ5 2229 aaKnown RBP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 YWHAQP27348 245 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 NSUN2Q08J23 767 aaKnown RBP eCLIP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 GPR152Q8TDT2 470 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 LRRN4Q8WUT4 740 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 CRYGNQ8WXF5 182 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 POPDC2Q9HBU9 364 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 MORF4L1Q9UBU8 362 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 GABRQQ9UN88 632 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 SASH3O75995 380 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 KPNA2P52292 529 aaKnown RBP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 VCPP55072 806 aaKnown RBP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 ZNF449Q6P9G9 518 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 AGR3Q8TD06 166 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 TRIM56Q9BRZ2 755 aaKnown RBP12.29□□□□□ -0.44
SGSM3-209ENST00000478085 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 SIX2Q9NPC8 291 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 MOSPD1Q9UJG1 213 aa12.29□□□□□ -0.44
SGSM3-209ENST00000478085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.28□□□□□ -0.44
SGSM3-209ENST00000478085 STK25O00506 426 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 HSPA4LO95757 839 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 S100BP04271 92 aaPredicted RBP12.28□□□□□ -0.44
SGSM3-209ENST00000478085 NCF2P19878 526 aaPredicted RBP12.28□□□□□ -0.44
SGSM3-209ENST00000478085 MMP8P22894 467 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 GJA5P36382 358 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 TAS2R40P59535 323 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 ZNF177Q13360 481 aaPredicted RBP12.28□□□□□ -0.44
SGSM3-209ENST00000478085 CDH18Q13634 790 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 SLC39A4Q6P5W5 647 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 PHF13Q86YI8 300 aaPredicted RBP12.28□□□□□ -0.44
SGSM3-209ENST00000478085 ZDHHC17Q8IUH5 632 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 NUDCD3Q8IVD9 361 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 NETO2Q8NC67 525 aa12.28□□□□□ -0.44
SGSM3-209ENST00000478085 PPP2R3CQ969Q6 453 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms