RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 TLR5O60602 858 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 LMNAP02545 664 aaKnown RBP10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 MBL2P11226 248 aaPredicted RBP10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 CXCL12P48061 93 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 FNTBP49356 437 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 UBE2HP62256 183 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 CUL2Q13617 745 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 PDGFRLQ15198 375 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 DHCR24Q15392 516 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 HECTD3Q5T447 861 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 ARHGEF19Q8IW93 802 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 TRIM59Q8IWR1 403 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 SRRTQ9BXP5 876 aaKnown RBP10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 IMPG2Q9BZV3 1241 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 ZSCAN32Q9NX65 697 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 KIAA1468Q9P260 1216 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 HCN2Q9UL51 889 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 USP3Q9Y6I4 520 aa10.8□□□□□ -0.68
LCLAT1-209ENST00000478015 HNRNPLP14866 589 aaKnown RBP eCLIP10.79□□□□□ -0.684e-7■■□□□ 13
LCLAT1-209ENST00000478015 TGM1P22735 817 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 MAGEA9P43362 315 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 PPP3CCP48454 512 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 LY6G5CQ5SRR4 150 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 EMC10Q5UCC4 262 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 RRAGAQ7L523 313 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 PIGZQ86VD9 579 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 ATP2A3Q93084 1043 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 CCDC34Q96HJ3 373 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 KREMEN1Q96MU8 473 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 TSG101Q99816 390 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 P2RY13Q9BPV8 354 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 KLF16Q9BXK1 252 aaPredicted RBP10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 ACP6Q9NPH0 428 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 CYLDQ9NQC7 956 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 SCML2Q9UQR0 700 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 RALGAPA1Q6GYQ0 2036 aa10.79□□□□□ -0.68
LCLAT1-209ENST00000478015 KLKB1P03952 638 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 IRF1P10914 325 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 IFNAR2P48551 515 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 KCNH2Q12809 1159 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 PKDCCQ504Y2 493 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 RAB41Q5JT25 222 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 GJB7Q6PEY0 223 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 TMEM25Q86YD3 366 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 PHTF2Q8N3S3 785 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 UBA3Q8TBC4 463 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 OVCA2Q8WZ82 227 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 MSANTD3Q96H12 275 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 CEP63Q96MT8 703 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 PCDHGA2Q9Y5H1 932 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 TUBP50607 506 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 CCR3P51677 355 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 PDE4CQ08493 712 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 GRSF1Q12849 480 aaKnown RBP eCLIP10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 PAK1Q13153 545 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 DGKKQ5KSL6 1271 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 ARHGAP17Q68EM7 881 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 CPA6Q8N4T0 437 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 NAT16Q8N8M0 369 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 RPLP0P6Q8NHW5 317 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 ATRIPQ8WXE1 791 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 CD101Q93033 1021 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 EPC1Q9H2F5 836 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 HOOK1Q9UJC3 728 aaKnown RBP10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 TSPAN16Q9UKR8 245 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 ATP8B3O60423 1300 aa10.78□□□□□ -0.68
LCLAT1-209ENST00000478015 FRYQ5TBA9 3013 aa10.77□□□□□ -0.68
LCLAT1-209ENST00000478015 O00370 1275 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 PIK3R2O00459 728 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 PMM2O15305 246 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 PAPSS2O95340 614 aaPredicted RBP10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 RARGP13631 454 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 PFKLP17858 780 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 SEC13P55735 322 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 MARSP56192 900 aaKnown RBP10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 GOLGA7BQ2TAP0 167 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 DPCR1Q3MIW9 517 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 CCDC40Q4G0X9 1142 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 C2orf27AQ580R0 203 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 TMEM270Q6UE05 265 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 MIB1Q86YT6 1006 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 ETFBKMTQ8IXQ9 262 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 KIAA2013Q8IYS2 634 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 ANKRD52Q8NB46 1076 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 PDZD8Q8NEN9 1154 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 HHIPQ96QV1 700 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 CRACR2AQ9BSW2 395 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 PARD6AQ9NPB6 346 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 LMBRD1Q9NUN5 540 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 EHD2Q9NZN4 543 aa10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 AJAP1Q9UKB5 411 aaPredicted RBP10.77□□□□□ -0.69
LCLAT1-209ENST00000478015 E2F8A0AVK6 867 aa10.76□□□□□ -0.69
LCLAT1-209ENST00000478015 STIM1Q13586 685 aa10.76□□□□□ -0.69
LCLAT1-209ENST00000478015 LRRC32Q14392 662 aa10.76□□□□□ -0.69
LCLAT1-209ENST00000478015 HSP90AA4PQ58FG1 418 aa10.76□□□□□ -0.69
LCLAT1-209ENST00000478015 DPY19L2P1Q6NXN4 242 aa10.76□□□□□ -0.69
LCLAT1-209ENST00000478015 PMF1Q6P1K2 205 aa10.76□□□□□ -0.69
LCLAT1-209ENST00000478015 C1orf228Q6PIY5 440 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms