RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 EIF4E1BA6NMX2 242 aaKnown RBP21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 COCHO43405 550 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 EIF5BO60841 1220 aaKnown RBP21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 PDGFRBP09619 1106 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 LONP1P36776 959 aaKnown RBP21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 CACNA2D1P54289 1103 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 MDH1BQ5I0G3 518 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 WDR45BQ5MNZ6 344 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 GLIS3Q8NEA6 775 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 PDZD8Q8NEN9 1154 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 FOXJ1Q92949 421 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 ANKRD36BP1Q96IX9 119 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 CBWD1Q9BRT8 395 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 ELOVL4Q9GZR5 314 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 MRPL44Q9H9J2 332 aaKnown RBP21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 CD93Q9NPY3 652 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 SPHK2Q9NRA0 654 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 INTS13Q9NVM9 706 aa21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 KIAA1522Q9P206 1035 aaPredicted RBP21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 R3HCC1Q9Y3T6 440 aaKnown RBP21.54■■□□□ 1.04
PDLIM1-202ENST00000477757 GOLGA8IPA6NC78 632 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 GOLGA8JA6NMD2 632 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 TRIM24O15164 1050 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 NDUFS2O75306 463 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 GRIN1Q05586 938 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 GRAMD4Q6IC98 578 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 DYMQ7RTS9 669 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 BBS7Q8IWZ6 715 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 CHPFQ8IZ52 775 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 OVCA2Q8WZ82 227 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 ACOX2Q99424 681 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 GABRG3Q99928 467 aa21.53■■□□□ 1.04
PDLIM1-202ENST00000477757 ZIC2O95409 532 aaPredicted RBP21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 GAP43P17677 238 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 ANO4Q32M45 955 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 SDE2Q6IQ49 451 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 TMPRSS7Q7RTY8 843 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 TMEM25Q86YD3 366 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 OR5B17Q8NGF7 314 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 BAHD1Q8TBE0 780 aaPredicted RBP21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 ZNF518BQ9C0D4 1074 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 CACNA2D2Q9NY47 1150 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 SH3BP1Q9Y3L3 701 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 NFE2L3Q9Y4A8 694 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 NME7Q9Y5B8 376 aa21.52■■□□□ 1.04
PDLIM1-202ENST00000477757 ZNF883P0CG24 379 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 YWHAQP27348 245 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 CASP5P51878 434 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 IFRD2Q12894 506 aaPredicted RBP21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 HS2ST1Q7LGA3 356 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 SPRYD3Q8NCJ5 442 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 ADAM32Q8TC27 787 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 DNASE2BQ8WZ79 361 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 MRGPRX1Q96LB2 322 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 MMS19Q96T76 1030 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 SLC6A17Q9H1V8 727 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 OLFML3Q9NRN5 406 aa21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 DNAJC17Q9NVM6 304 aaKnown RBP21.51■■□□□ 1.03
PDLIM1-202ENST00000477757 A0A1B0GTW7 788 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 CACNG3O60359 315 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 DKK1O94907 266 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 RTN3O95197 1032 aaPredicted RBP21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 GCNT3O95395 438 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 TNNC2P02585 160 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 TUBP50607 506 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 HECTD3Q5T447 861 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 SNX30Q5VWJ9 437 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 SYCP3Q8IZU3 236 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 NUP93Q8N1F7 819 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 GPD1LQ8N335 351 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 NOC3LQ8WTT2 800 aaKnown RBP21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 FBXO32Q969P5 355 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 ERLEC1Q96DZ1 483 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 MRPL45Q9BRJ2 306 aaKnown RBP21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 SNX25Q9H3E2 840 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 TOR4AQ9NXH8 423 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 TBC1D7Q9P0N9 293 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 RAD54BQ9Y620 910 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 CFAP46Q8IYW2 2715 aa21.5■■□□□ 1.03
PDLIM1-202ENST00000477757 A0A087WV48 116 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 MEI4A8MW99 385 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 TACC1O75410 805 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 BMP15O95972 392 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 MAOBP27338 520 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 CD6P30203 668 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 GNL1P36915 607 aaPredicted RBP21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 ALCAMQ13740 583 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 ZCCHC9Q8N567 271 aaKnown RBP21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 SETD7Q8WTS6 366 aaKnown RBP21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 DNAJC19Q96DA6 116 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 PCIF1Q9H4Z3 704 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 CCSER2Q9H7U1 834 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 IL21RQ9HBE5 538 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 STK17AQ9UEE5 414 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 PCDHB13Q9Y5F0 798 aa21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 URB1O60287 2271 aaKnown RBP21.49■■□□□ 1.03
PDLIM1-202ENST00000477757 MAST4O15021 2626 aa21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 PRRT4C9JH25 899 aa21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 GFRA2O00451 464 aa21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 CER1O95813 267 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms