RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 EDEM2Q9BV94 578 aa12.04□□□□□ -0.48
HDLBP-236ENST00000477477 CSNK1G1Q9HCP0 422 aa12.04□□□□□ -0.48
HDLBP-236ENST00000477477 SH3BP1Q9Y3L3 701 aa12.04□□□□□ -0.48
HDLBP-236ENST00000477477 RALGAPA1Q6GYQ0 2036 aa12.04□□□□□ -0.48
HDLBP-236ENST00000477477 CNOT1A5YKK6 2376 aaKnown RBP12.04□□□□□ -0.48
HDLBP-236ENST00000477477 MYO16Q9Y6X6 1858 aa12.04□□□□□ -0.48
HDLBP-236ENST00000477477 CHD8Q9HCK8 2581 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 A0A0A0MRY4 1105 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 SGK1O00141 431 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 BEST1O76090 585 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 ALDH1A2O94788 518 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 ASS1P00966 412 aaKnown RBP12.03□□□□□ -0.48
HDLBP-236ENST00000477477 RPN1P04843 607 aaKnown RBP12.03□□□□□ -0.48
HDLBP-236ENST00000477477 MYL1P05976 194 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 CMA1P23946 247 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 PMLP29590 882 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 TIE1P35590 1138 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 PIK3CAP42336 1068 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 ASPAP45381 313 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 ORC1Q13415 861 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 EOGTQ5NDL2 527 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 C1orf220Q5T0J3 134 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 EMC10Q5UCC4 262 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 CEP135Q66GS9 1140 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 SPOPLQ6IQ16 392 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 CYP2U1Q7Z449 544 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 TTC30AQ86WT1 665 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 BBS7Q8IWZ6 715 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 PHTF2Q8N3S3 785 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 SLC2A14Q8TDB8 520 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 WBP2Q969T9 261 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 LSM14BQ9BX40 385 aaKnown RBP12.03□□□□□ -0.48
HDLBP-236ENST00000477477 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 HPSEQ9Y251 543 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 LAMA1P25391 3075 aa12.03□□□□□ -0.48
HDLBP-236ENST00000477477 A0A1B0GVL5 298 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 LNP1A1A4G5 178 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 IKBKBO14920 756 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 CALUO43852 315 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-236ENST00000477477 TLR5O60602 858 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 ADAM23O75077 832 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 TULP3O75386 442 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 HLA-DRAP01903 254 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 IRF1P10914 325 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 P2RY2P41231 377 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 TNFRSF4P43489 277 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 PGFP49763 221 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 VAMP7P51809 220 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 MAP3K7CLP57077 242 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 N4BP2L1Q5TBK1 243 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-236ENST00000477477 BTBD8Q5XKL5 378 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 C12orf29Q8N999 325 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 WHAMMQ8TF30 809 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 NACA2Q9H009 215 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 FBXO44Q9H4M3 255 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-236ENST00000477477 ZDHHC4Q9NPG8 344 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 SPHK2Q9NRA0 654 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 FAM49BQ9NUQ9 324 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 TRAF3IP3Q9Y228 551 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 FRMD4BQ9Y2L6 1034 aa12.02□□□□□ -0.49
HDLBP-236ENST00000477477 KMT2BQ9UMN6 2715 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-236ENST00000477477 TCRBV21S2A2A0A5A6 115 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 TBC1D3BA6NDS4 549 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 MAPK13O15264 365 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 GREM1O60565 184 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 KCNK5O95279 499 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 TRIM21P19474 475 aaKnown RBP12.01□□□□□ -0.49
HDLBP-236ENST00000477477 ADORA2BP29275 332 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 INCA1Q0VD86 236 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 PREPLQ4J6C6 727 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-236ENST00000477477 GPRIN1Q7Z2K8 1008 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 TMEM25Q86YD3 366 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 NAT16Q8N8M0 369 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 TERB1Q8NA31 727 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 RLN3Q8WXF3 142 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 SPACA7Q96KW9 195 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 TWNKQ96RR1 684 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 APOBEC3GQ9HC16 384 aaKnown RBP12.01□□□□□ -0.49
HDLBP-236ENST00000477477 CYLDQ9NQC7 956 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 TLR8Q9NR97 1041 aaKnown RBP12.01□□□□□ -0.49
HDLBP-236ENST00000477477 BCCIPQ9P287 314 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDLBP-236ENST00000477477 DEC1Q9P2X7 70 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 ANGPTL2Q9UKU9 493 aa12.01□□□□□ -0.49
HDLBP-236ENST00000477477 C4orf47A7E2U8 309 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 HHLA1C9JL84 531 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 KHNYNO15037 678 aaKnown RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 KRT37O76014 449 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 RHOBTB3O94955 611 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 KIF20AO95235 890 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 TBX18O95935 607 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 PRR29P0C7W0 189 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 TRIM49P0CI25 452 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 TRIM49CP0CI26 452 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 NR2F2P24468 414 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 SYKP43405 635 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms