RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 MT-CO1P00395 513 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 LMNAP02545 664 aaKnown RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 AMY1AP04745 511 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 ZNF853P0CG23 659 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 HKR1P10072 659 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 DDCP20711 480 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 IFIT5Q13325 482 aaKnown RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 RAPGEF1Q13905 1077 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 MORC3Q14149 939 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 ACAP2Q15057 778 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 INO80DQ53TQ3 878 aaPredicted RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 WDR78Q5VTH9 848 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 SEM1Q6ZVN7 128 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 DGKHQ86XP1 1220 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 SPICE1Q8N0Z3 855 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 TMEM132CQ8N3T6 1108 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 ZGPATQ8N5A5 531 aaKnown RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 MAGEB6Q8N7X4 407 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 PI4KAP1Q8N8J0 262 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 GPATCH11Q8N954 259 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 TBC1D22AQ8WUA7 517 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 ZKSCAN4Q969J2 545 aaPredicted RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 COA7Q96BR5 231 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 MTMR8Q96EF0 704 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 ALOXE3Q9BYJ1 711 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 RNPEPQ9H4A4 650 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 PTPRHQ9HD43 1115 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 MKS1Q9NXB0 559 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 MAP3K20Q9NYL2 800 aaKnown RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 TESQ9UGI8 421 aaKnown RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 TAGLN3Q9UI15 199 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 ZNF112Q9UJU3 913 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 OGDHLQ9ULD0 1010 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 ZMYND8Q9ULU4 1186 aaPredicted RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 UNC80Q8N2C7 3258 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 AOX1Q06278 1338 aa4.42□□□□□ -1.7
RPL39-203ENST00000477403 MYBBP1AQ9BQG0 1328 aaKnown RBP4.42□□□□□ -1.7
RPL39-203ENST00000477403 TCRBV7S2A1N4TA0A589 114 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 TRIM75PA6NK02 468 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 TNPO2O14787 897 aaKnown RBP4.41□□□□□ -1.7
RPL39-203ENST00000477403 KIAA0391O15091 583 aaKnown RBP4.41□□□□□ -1.7
RPL39-203ENST00000477403 TBX3O15119 743 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 TAF5LO75529 589 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 GPANK1O95872 356 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 ALAS1P13196 640 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 FGFR4P22455 802 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 GNAI1P63096 354 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 HSD11B2P80365 405 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 CREMQ03060 361 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 OCA2Q04671 838 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 MTM1Q13496 603 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 GCKRQ14397 625 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 GRAMD1BQ3KR37 738 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 ABHD17BQ5VST6 288 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 B3GNTL1Q67FW5 361 aaPredicted RBP4.41□□□□□ -1.7
RPL39-203ENST00000477403 ARMC6Q6NXE6 501 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 OLFML1Q6UWY5 402 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 C1orf162Q8NEQ5 155 aaPredicted RBP4.41□□□□□ -1.7
RPL39-203ENST00000477403 RAB24Q969Q5 203 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 TEKT1Q969V4 418 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 RUNDC1Q96C34 613 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 CHMP4CQ96CF2 233 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 GUCD1Q96NT3 240 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.41□□□□□ -1.7
RPL39-203ENST00000477403 CCDC8Q9H0W5 538 aaPredicted RBP4.41□□□□□ -1.7
RPL39-203ENST00000477403 GSTO2Q9H4Y5 243 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 C11orf49Q9H6J7 331 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 RIOX1Q9H6W3 641 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 PRKRIP1Q9H875 184 aaPredicted RBP4.41□□□□□ -1.7
RPL39-203ENST00000477403 PPCSQ9HAB8 311 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 AASDHPPTQ9NRN7 309 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 SYBUQ9NX95 663 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 USP25Q9UHP3 1055 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 SAP30BPQ9UHR5 308 aaKnown RBP4.41□□□□□ -1.7
RPL39-203ENST00000477403 GABRQQ9UN88 632 aa4.41□□□□□ -1.7
RPL39-203ENST00000477403 LAMB2P55268 1798 aa4.4□□□□□ -1.7
RPL39-203ENST00000477403 VCANP13611 3396 aa4.4□□□□□ -1.7
RPL39-203ENST00000477403 CCDC78A2IDD5 438 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 CDHR4A6H8M9 788 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 GOLGA6CA6NDK9 693 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 GOLGA6BA6NDN3 693 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 SNAP23O00161 211 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 XPOTO43592 962 aaKnown RBP4.4□□□□□ -1.71
RPL39-203ENST00000477403 NDUFS2O75306 463 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 ERN1O75460 977 aaKnown RBP4.4□□□□□ -1.71
RPL39-203ENST00000477403 RFPL1O75677 317 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 GOLGA6DP0CG33 693 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 MYBL2P10244 700 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 EGR2P11161 476 aaPredicted RBP4.4□□□□□ -1.71
RPL39-203ENST00000477403 GCSHP23434 173 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 ADRA1BP35368 520 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 GCLCP48506 637 aaPredicted RBP4.4□□□□□ -1.71
RPL39-203ENST00000477403 SEC24CP53992 1094 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 ITKQ08881 620 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 ATP2B3Q16720 1220 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 ABCB5Q2M3G0 1257 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 GFOD2Q3B7J2 385 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 CCDC184Q52MB2 194 aa4.4□□□□□ -1.71
RPL39-203ENST00000477403 APOBEC3HQ6NTF7 200 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms