RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 POPDC2Q9HBU9 364 aa30.18■■■□□ 2.42
VEGFA-211ENST00000476772 TLL1O43897 1013 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 SCML4Q8N228 414 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 SP7Q8TDD2 431 aaPredicted RBP30.17■■■□□ 2.42
VEGFA-211ENST00000476772 C2orf15Q8WU43 125 aaKnown RBP30.17■■■□□ 2.42
VEGFA-211ENST00000476772 CLP1Q92989 425 aaKnown RBP30.17■■■□□ 2.42
VEGFA-211ENST00000476772 ACSF2Q96CM8 615 aaPredicted RBP30.17■■■□□ 2.42
VEGFA-211ENST00000476772 CLSTN3Q9BQT9 956 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 PLVAPQ9BX97 442 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 MTIF3Q9H2K0 278 aaKnown RBP30.17■■■□□ 2.42
VEGFA-211ENST00000476772 USP18Q9UMW8 372 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 SLC27A5Q9Y2P5 690 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 LCHNA4D1U4 455 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 KRT1P04264 644 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 DESP17661 470 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 IFRD2Q12894 506 aaPredicted RBP30.17■■■□□ 2.42
VEGFA-211ENST00000476772 SMTNL2Q2TAL5 461 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 DCAF6Q58WW2 860 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 ZFYVE27Q5T4F4 411 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 VPS52Q8N1B4 723 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 STKLD1Q8NE28 680 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 EXD1Q8NHP7 514 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 IRGQQ8WZA9 623 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 PEBP4Q96S96 227 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 AP1M1Q9BXS5 423 aa30.17■■■□□ 2.42
VEGFA-211ENST00000476772 SOAT2O75908 522 aa30.16■■■□□ 2.42
VEGFA-211ENST00000476772 FGF18O76093 207 aa30.16■■■□□ 2.42
VEGFA-211ENST00000476772 ZRANB2O95218 330 aaKnown RBP eCLIP30.16■■■□□ 2.424e-17■■□□□ 11.4
VEGFA-211ENST00000476772 TRUB2O95900 331 aaKnown RBP30.16■■■□□ 2.42
VEGFA-211ENST00000476772 LTFP02788 710 aa30.16■■■□□ 2.42
VEGFA-211ENST00000476772 URODP06132 367 aa30.16■■■□□ 2.42
VEGFA-211ENST00000476772 FYNP06241 537 aa30.16■■■□□ 2.42
VEGFA-211ENST00000476772 ADAT2Q7Z6V5 191 aaKnown RBP30.16■■■□□ 2.42
VEGFA-211ENST00000476772 CCDC50Q8IVM0 306 aa30.16■■■□□ 2.42
VEGFA-211ENST00000476772 TBCBQ99426 244 aa30.16■■■□□ 2.42
VEGFA-211ENST00000476772 SEPT5Q99719 369 aaPredicted RBP30.16■■■□□ 2.42
VEGFA-211ENST00000476772 DDX56Q9NY93 547 aaKnown RBP30.16■■■□□ 2.42
VEGFA-211ENST00000476772 KRT7P08729 469 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 NOS2P35228 1153 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 HDAC4P56524 1084 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 DUSP4Q13115 394 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 LLGL1Q15334 1064 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 ELF2Q15723 593 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 MGAT5BQ3V5L5 792 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 KCNT1Q5JUK3 1230 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 CENPIQ92674 756 aaPredicted RBP30.15■■■□□ 2.42
VEGFA-211ENST00000476772 RNF25Q96BH1 459 aaPredicted RBP30.15■■■□□ 2.42
VEGFA-211ENST00000476772 NAP1L3Q99457 506 aaPredicted RBP30.15■■■□□ 2.42
VEGFA-211ENST00000476772 NAALADL1Q9UQQ1 740 aa30.15■■■□□ 2.42
VEGFA-211ENST00000476772 PI4K2BG5E9Z4 385 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 KRIT1O00522 736 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 HAPLN1P10915 354 aaPredicted RBP30.14■■■□□ 2.42
VEGFA-211ENST00000476772 DNAJB2P25686 324 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 SULT1E1P49888 294 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 KRT17Q04695 432 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 SMC1AQ14683 1233 aaKnown RBP30.14■■■□□ 2.42
VEGFA-211ENST00000476772 COL13A1Q5TAT6 717 aaPredicted RBP30.14■■■□□ 2.42
VEGFA-211ENST00000476772 RASIP1Q5U651 963 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 SYPL2Q5VXT5 272 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 CYP4V2Q6ZWL3 525 aaPredicted RBP30.14■■■□□ 2.42
VEGFA-211ENST00000476772 SLC13A5Q86YT5 568 aaPredicted RBP30.14■■■□□ 2.42
VEGFA-211ENST00000476772 NUP93Q8N1F7 819 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 AUTS2Q8WXX7 1259 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 MYO16Q9Y6X6 1858 aa30.14■■■□□ 2.42
VEGFA-211ENST00000476772 PITX1P78337 314 aaPredicted RBP30.14■■■□□ 2.41
VEGFA-211ENST00000476772 CLUL1Q15846 466 aa30.14■■■□□ 2.41
VEGFA-211ENST00000476772 SLC25A52Q3SY17 297 aa30.14■■■□□ 2.41
VEGFA-211ENST00000476772 OTUD1Q5VV17 481 aaPredicted RBP30.14■■■□□ 2.41
VEGFA-211ENST00000476772 RCOR2Q8IZ40 523 aa30.14■■■□□ 2.41
VEGFA-211ENST00000476772 MMGT1Q8N4V1 131 aa30.14■■■□□ 2.41
VEGFA-211ENST00000476772 RAPGEF5Q92565 580 aa30.14■■■□□ 2.41
VEGFA-211ENST00000476772 RBM41Q96IZ5 413 aaKnown RBP30.14■■■□□ 2.41
VEGFA-211ENST00000476772 CALCOCO1Q9P1Z2 691 aa30.14■■■□□ 2.41
VEGFA-211ENST00000476772 CAPN9O14815 690 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 PRPSAP2O60256 369 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 ATXN1P54253 815 aaKnown RBP30.13■■■□□ 2.41
VEGFA-211ENST00000476772 SCYL2Q6P3W7 929 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 ANKS1BQ7Z6G8 1248 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 KLHL23Q8NBE8 558 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 GPR152Q8TDT2 470 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 NT5C3BQ969T7 300 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 SLITRK1Q96PX8 696 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 NPY6RQ99463 290 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 NCAPGQ9BPX3 1015 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 HERPUD2Q9BSE4 406 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 EPC1Q9H2F5 836 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 STAP1Q9ULZ2 295 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 NR2E1Q9Y466 385 aa30.13■■■□□ 2.41
VEGFA-211ENST00000476772 COL4A4P53420 1690 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-211ENST00000476772 TCRBV7S2A1N4TA0A589 114 aa30.12■■■□□ 2.41
VEGFA-211ENST00000476772 CCDC85CA6NKD9 419 aa30.12■■■□□ 2.41
VEGFA-211ENST00000476772 RARAP10276 462 aa30.12■■■□□ 2.41
VEGFA-211ENST00000476772 TUBB4BP68371 445 aa30.12■■■□□ 2.41
VEGFA-211ENST00000476772 STRADAQ7RTN6 431 aa30.12■■■□□ 2.41
VEGFA-211ENST00000476772 PLXNA4Q9HCM2 1894 aa30.12■■■□□ 2.41
VEGFA-211ENST00000476772 LRRD1A4D1F6 860 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 NCAM1P13591 858 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 ODF2Q5BJF6 829 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 BSPRYQ5W0U4 402 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 MFSD7Q6UXD7 560 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms