RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 DPYSL4O14531 572 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 CHUKO15111 745 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 CCND3P30281 292 aaPredicted RBP17.16■□□□□ 0.34
TMEM53-208ENST00000476724 CDH6P55285 790 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 CDC42EP1Q00587 391 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 ROR1Q01973 937 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 GNASQ5JWF2 1037 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 FNBP1LQ5T0N5 605 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 ANKRD22Q5VYY1 191 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 CCDC63Q8NA47 563 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 KIF12Q96FN5 646 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 XPO7Q9UIA9 1087 aaKnown RBP17.16■□□□□ 0.34
TMEM53-208ENST00000476724 HTTP42858 3142 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 CLUHO75153 1309 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 SCN10AQ9Y5Y9 1956 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 E5RJQ4 531 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 MGRN1O60291 552 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 TRPA1O75762 1119 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 FOXN2P32314 431 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 GBP2P32456 591 aaPredicted RBP17.16■□□□□ 0.34
TMEM53-208ENST00000476724 RNASELQ05823 741 aaKnown RBP17.16■□□□□ 0.34
TMEM53-208ENST00000476724 ADCY1Q08828 1119 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 BNIP1Q12981 228 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 TAF5Q15542 800 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 SNCBQ16143 134 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 DARS2Q6PI48 645 aaKnown RBP17.16■□□□□ 0.34
TMEM53-208ENST00000476724 CXCL17Q6UXB2 119 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 FAM183BPQ6ZVS7 135 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 ANKMY2Q8IV38 441 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 FAM71DQ8N9W8 422 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 MAGEC3Q8TD91 643 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 TEKT4Q8WW24 435 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 TMEM40Q8WWA1 233 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 ALKBH8Q96BT7 664 aaKnown RBP17.16■□□□□ 0.34
TMEM53-208ENST00000476724 TBCBQ99426 244 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 DHRS4Q9BTZ2 278 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 KATNAL1Q9BW62 490 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 FRMD8Q9BZ67 464 aaPredicted RBP17.16■□□□□ 0.34
TMEM53-208ENST00000476724 C17orf102A2RUQ5 167 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 CFAP69A5D8W1 941 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 TYROBPO43914 113 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 SPAG7O75391 227 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 UBOX5O94941 541 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 ZWINTO95229 277 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 CA4P22748 312 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 HOXA11P31270 313 aaPredicted RBP17.15■□□□□ 0.34
TMEM53-208ENST00000476724 CCDC15Q0P6D6 951 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 SF3A3Q12874 501 aaKnown RBP eCLIP17.15■□□□□ 0.34
TMEM53-208ENST00000476724 PDK4Q16654 411 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 FAM133BQ5BKY9 247 aaKnown RBP17.15■□□□□ 0.34
TMEM53-208ENST00000476724 CAPN12Q6ZSI9 719 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 DPH6Q7L8W6 267 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 ZDHHC17Q8IUH5 632 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 FBXO36Q8NEA4 188 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.15■□□□□ 0.34
TMEM53-208ENST00000476724 RNF157Q96PX1 679 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 PEBP4Q96S96 227 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 C10orf88Q9H8K7 445 aa17.15■□□□□ 0.34
TMEM53-208ENST00000476724 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.15■□□□□ 0.34
TMEM53-208ENST00000476724 SEPT4O43236 478 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 SPAG6O75602 509 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 PFKMP08237 780 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 SSTR1P30872 391 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 HOXC8P31273 242 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 BASP1P80723 227 aaKnown RBP17.14■□□□□ 0.33
TMEM53-208ENST00000476724 ZKSCAN8Q15776 578 aaPredicted RBP17.14■□□□□ 0.33
TMEM53-208ENST00000476724 CYP4V2Q6ZWL3 525 aaPredicted RBP17.14■□□□□ 0.33
TMEM53-208ENST00000476724 C7orf31Q8N865 590 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 STK32AQ8WU08 396 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 PAIP2Q9BPZ3 127 aaKnown RBP17.14■□□□□ 0.33
TMEM53-208ENST00000476724 GCOM2Q9BZD3 368 aaPredicted RBP17.14■□□□□ 0.33
TMEM53-208ENST00000476724 DNAH12Q6ZR08 3092 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 ZNF487B1APH4 448 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 CHADO15335 359 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 CYP3A5P20815 502 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 TGM2P21980 687 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 MSH2P43246 934 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 PDE4CQ08493 712 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 KRT81Q14533 505 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 PCBP1Q15365 356 aaKnown RBP eCLIP17.14■□□□□ 0.33
TMEM53-208ENST00000476724 GOLGA7BQ2TAP0 167 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 MSS51Q4VC12 460 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 PKDCCQ504Y2 493 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 TMEM110Q86TL2 294 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 UNC93AQ86WB7 457 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 CD99L2Q8TCZ2 262 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 FBF1Q8TES7 1133 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 SLC4A5Q9BY07 1137 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 PAK5Q9P286 719 aa17.14■□□□□ 0.33
TMEM53-208ENST00000476724 TMEM63AO94886 807 aa17.13■□□□□ 0.33
TMEM53-208ENST00000476724 DARSP14868 501 aaKnown RBP17.13■□□□□ 0.33
TMEM53-208ENST00000476724 RPA3P35244 121 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-208ENST00000476724 ELF3P78545 371 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-208ENST00000476724 HTRA3P83110 453 aa17.13■□□□□ 0.33
TMEM53-208ENST00000476724 SLC6A3Q01959 620 aa17.13■□□□□ 0.33
TMEM53-208ENST00000476724 BBS9Q3SYG4 887 aa17.13■□□□□ 0.33
TMEM53-208ENST00000476724 CCDC14Q49A88 953 aa17.13■□□□□ 0.33
TMEM53-208ENST00000476724 HHATQ5VTY9 493 aa17.13■□□□□ 0.33
TMEM53-208ENST00000476724 CGB2Q6NT52 195 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms