RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 RAB20Q9NX57 234 aa18.64■□□□□ 0.57
LCLAT1-208ENST00000476535 SCML2Q9UQR0 700 aa18.64■□□□□ 0.57
LCLAT1-208ENST00000476535 ADH1CP00326 375 aa18.63■□□□□ 0.57
LCLAT1-208ENST00000476535 HOXC13P31276 330 aa18.63■□□□□ 0.57
LCLAT1-208ENST00000476535 SRSF5Q13243 272 aaKnown RBP18.63■□□□□ 0.57
LCLAT1-208ENST00000476535 ANKRD40Q6AI12 368 aa18.63■□□□□ 0.57
LCLAT1-208ENST00000476535 CYLDQ9NQC7 956 aa18.63■□□□□ 0.57
LCLAT1-208ENST00000476535 COQ4Q9Y3A0 265 aa18.63■□□□□ 0.57
LCLAT1-208ENST00000476535 DNAH14Q0VDD8 3507 aa18.63■□□□□ 0.57
LCLAT1-208ENST00000476535 TLR5O60602 858 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 PMS1P54277 932 aaKnown RBP18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 LMNB2Q03252 620 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 LPAL2Q16609 132 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 RHBDF2Q6PJF5 856 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 GPRIN1Q7Z2K8 1008 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 GAB3Q8WWW8 586 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 ERCC4Q92889 916 aaPredicted RBP18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 CISHQ9NSE2 258 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 DLL3Q9NYJ7 618 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 SH3BP1Q9Y3L3 701 aa18.62■□□□□ 0.57
LCLAT1-208ENST00000476535 PRR5-ARHGAP8B1AHC4 643 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 K7EQS6 105 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 PSMA7O14818 248 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 ADH5P11766 374 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 PPP1R2P41236 205 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 PGFP49763 221 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 KIF11P52732 1056 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 ARHGAP8P85298 464 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 STIM1Q13586 685 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 DMC1Q14565 340 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 PUM1Q14671 1186 aaKnown RBP eCLIP18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 CBWD6Q4V339 395 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 DCAF17Q5H9S7 520 aaPredicted RBP18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 CBWD3Q5JTY5 395 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 CBWD5Q5RIA9 395 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 PPP1R26Q5T8A7 1209 aaPredicted RBP18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 TCERG1LQ5VWI1 586 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 KLHDC10Q6PID8 442 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 CEP68Q76N32 757 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 USP33Q8TEY7 942 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 DUSP16Q9BY84 665 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 NACA2Q9H009 215 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 PARD6AQ9NPB6 346 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 EBF1Q9UH73 591 aa18.61■□□□□ 0.57
LCLAT1-208ENST00000476535 A0A0A0MRY4 1105 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 TRIM49BA6NDI0 452 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 SCAMP3O14828 347 aaKnown RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 CYP26A1O43174 497 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 HOXC11O43248 304 aaPredicted RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 RPP40O75818 363 aaKnown RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 APBB3O95704 486 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 ACO1P21399 889 aaKnown RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 SDHBP21912 280 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 PXNP49023 591 aaPredicted RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 ZNF394Q53GI3 561 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 LY6G5CQ5SRR4 150 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 FOXR2Q6PJQ5 311 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 CCDC186Q7Z3E2 898 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 ZNF276Q8N554 614 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 FAM160A2Q8N612 972 aaPredicted RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 SLC4A11Q8NBS3 891 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 SLC35C1Q96A29 364 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 TMEM176AQ96HP8 235 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 DHTKD1Q96HY7 919 aaPredicted RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 HEXIM2Q96MH2 286 aaKnown RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 CEP63Q96MT8 703 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 HHIPQ96QV1 700 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 PNKPQ96T60 521 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 KLF16Q9BXK1 252 aaPredicted RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 POLR3BQ9NW08 1133 aaPredicted RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 ARMCX3Q9UH62 379 aaPredicted RBP18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 USP18Q9UMW8 372 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 USP3Q9Y6I4 520 aa18.6■□□□□ 0.57
LCLAT1-208ENST00000476535 AXIN1O15169 862 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 ATP5C1P36542 298 aaKnown RBP18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 PSEN1P49768 467 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 RAD23BP54727 409 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 MRPS21P82921 87 aaKnown RBP18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 GAD2Q05329 585 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 GOLGA8FQ08AF8 430 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 GOLGA8DPQ0D2H9 430 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 SPEM2Q0P670 501 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 HSF5Q4G112 596 aaPredicted RBP18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 ARHGAP17Q68EM7 881 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 HTR3DQ70Z44 454 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 CACNA2D4Q7Z3S7 1137 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 C12orf40Q86WS4 652 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 BBS7Q8IWZ6 715 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 TATDN2Q93075 761 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 JAKMIP2Q96AA8 810 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 LOXL4Q96JB6 756 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 ARID3AQ99856 593 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 UBXN6Q9BZV1 441 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 METTL14Q9HCE5 456 aaKnown RBP18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 OSER1Q9NX31 292 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 MAN1B1Q9UKM7 699 aa18.59■□□□□ 0.57
LCLAT1-208ENST00000476535 MMP17Q9ULZ9 603 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms