RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PCGF5Q86SE9 256 aa17.36■□□□□ 0.37
TVP23B-202ENST00000476139 C4orf33Q8N1A6 199 aa17.36■□□□□ 0.37
TVP23B-202ENST00000476139 TTC39CQ8N584 583 aa17.36■□□□□ 0.37
TVP23B-202ENST00000476139 PLD5Q8N7P1 536 aa17.36■□□□□ 0.37
TVP23B-202ENST00000476139 FBXO36Q8NEA4 188 aa17.36■□□□□ 0.37
TVP23B-202ENST00000476139 KPNA7A9QM74 516 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 PIRO00625 290 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 AVILO75366 819 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 KRT15P19012 456 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 GNL1P36915 607 aaPredicted RBP17.35■□□□□ 0.37
TVP23B-202ENST00000476139 MAP2K5Q13163 448 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 CEP128Q6ZU80 1094 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 TRABD2AQ86V40 505 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 PQLC3Q8N755 202 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 LRRC52Q8N7C0 313 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.35■□□□□ 0.37
TVP23B-202ENST00000476139 NDRG1Q92597 394 aaKnown RBP17.35■□□□□ 0.37
TVP23B-202ENST00000476139 SGSM3Q96HU1 749 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 TGS1Q96RS0 853 aaKnown RBP17.35■□□□□ 0.37
TVP23B-202ENST00000476139 RRAGCQ9HB90 399 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 CACNG4Q9UBN1 327 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 BAIAP2L1Q9UHR4 511 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 SCN4AP35499 1836 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 H7C0C1 242 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 ATP5OP48047 213 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 ROR1Q01973 937 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 NOMO1Q15155 1222 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 STILQ15468 1287 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 BBS9Q3SYG4 887 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 IGDCC3Q8IVU1 814 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 KIF2BQ8N4N8 673 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 PCDH19Q8TAB3 1148 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 CKAP2Q8WWK9 683 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 SPOCK2Q92563 424 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 SNRNP25Q9BV90 132 aaKnown RBP17.35■□□□□ 0.37
TVP23B-202ENST00000476139 FRMD8P1Q9BZ68 369 aaPredicted RBP17.35■□□□□ 0.37
TVP23B-202ENST00000476139 NSRP1Q9H0G5 558 aaKnown RBP17.35■□□□□ 0.37
TVP23B-202ENST00000476139 RABGEF1Q9UJ41 708 aa17.35■□□□□ 0.37
TVP23B-202ENST00000476139 ARL4CP56559 192 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 WDR4P57081 412 aaKnown RBP17.34■□□□□ 0.37
TVP23B-202ENST00000476139 UBXN11Q5T124 520 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 TBC1D31Q96DN5 1066 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 USP29Q9HBJ7 922 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 USP15Q9Y4E8 981 aaPredicted RBP17.34■□□□□ 0.37
TVP23B-202ENST00000476139 FKBP1BP68106 108 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 ITIH4Q14624 930 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 SNCBQ16143 134 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 BOLA3Q53S33 107 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 CCDC63Q8NA47 563 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 SLC2A14Q8TDB8 520 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 PCDH18Q9HCL0 1135 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 UBQLN1Q9UMX0 589 aaKnown RBP17.34■□□□□ 0.37
TVP23B-202ENST00000476139 TRIM33Q9UPN9 1127 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 TRIP12Q14669 1992 aaPredicted RBP17.34■□□□□ 0.37
TVP23B-202ENST00000476139 FOXN2P32314 431 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 PSEN2P49810 448 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 KCNJ2P63252 427 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 CDC42EP1Q00587 391 aa17.34■□□□□ 0.37
TVP23B-202ENST00000476139 FAM124BQ9H5Z6 455 aaPredicted RBP17.34■□□□□ 0.37
TVP23B-202ENST00000476139 HTTP42858 3142 aa17.33■□□□□ 0.37
TVP23B-202ENST00000476139 KCNN4O15554 427 aa17.33■□□□□ 0.37
TVP23B-202ENST00000476139 RBL1P28749 1068 aa17.33■□□□□ 0.37
TVP23B-202ENST00000476139 STIP1P31948 543 aaKnown RBP17.33■□□□□ 0.37
TVP23B-202ENST00000476139 XRCC4Q13426 336 aa17.33■□□□□ 0.37
TVP23B-202ENST00000476139 FAXCQ5TGI0 409 aa17.33■□□□□ 0.37
TVP23B-202ENST00000476139 APBB1IPQ7Z5R6 666 aaPredicted RBP17.33■□□□□ 0.37
TVP23B-202ENST00000476139 FBF1Q8TES7 1133 aa17.33■□□□□ 0.37
TVP23B-202ENST00000476139 NKIRAS1Q9NYS0 192 aa17.33■□□□□ 0.37
TVP23B-202ENST00000476139 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.33■□□□□ 0.37
TVP23B-202ENST00000476139 MEIS3P2A8K0S8 358 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 BCAR1P56945 870 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 ELF3P78545 371 aaPredicted RBP17.33■□□□□ 0.36
TVP23B-202ENST00000476139 ARHGEF18Q6ZSZ5 1173 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 UNC93AQ86WB7 457 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 MAP7D3Q8IWC1 876 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 ANKRD52Q8NB46 1076 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 RMDN2Q96LZ7 410 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 ZFP42Q96MM3 310 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 TRABDQ9H4I3 376 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 ZMYND8Q9ULU4 1186 aaPredicted RBP17.33■□□□□ 0.36
TVP23B-202ENST00000476139 CHMP2BQ9UQN3 213 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 IPPQ9Y573 584 aa17.33■□□□□ 0.36
TVP23B-202ENST00000476139 FAM47DPA6NHR8 397 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 GHRP10912 638 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 RPA3P35244 121 aaPredicted RBP17.32■□□□□ 0.36
TVP23B-202ENST00000476139 TFDP2Q14188 446 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 TDRPQ86YL5 185 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 PALM2Q8IXS6 379 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 SMG8Q8ND04 991 aaKnown RBP17.32■□□□□ 0.36
TVP23B-202ENST00000476139 NR2E3Q9Y5X4 410 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 ACTL7BQ9Y614 415 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 HAS3O00219 553 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 DPYSL4O14531 572 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 TKTP29401 623 aaKnown RBP17.32■□□□□ 0.36
TVP23B-202ENST00000476139 HUNKP57058 714 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 FAM47CQ5HY64 1035 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 CGB2Q6NT52 195 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 PDIK1LQ8N165 341 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 AGGF1Q8N302 714 aaeCLIP17.32■□□□□ 0.36
TVP23B-202ENST00000476139 RIBC1Q8N443 379 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms