RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 FOLH1Q04609 750 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 DPYSL3Q14195 570 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 PSMD6Q15008 389 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 LGSNQ5TDP6 509 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 FBXL19Q6PCT2 694 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 ARPINQ7Z6K5 226 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 ICA1LQ8NDH6 482 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 EBF4Q9BQW3 602 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 STN1Q9H668 368 aaKnown RBP18.43■□□□□ 0.54
CCM2-207ENST00000475551 APOBEC3GQ9HC16 384 aaKnown RBP18.43■□□□□ 0.54
CCM2-207ENST00000475551 AGO4Q9HCK5 861 aaKnown RBP18.43■□□□□ 0.54
CCM2-207ENST00000475551 ANKEF1Q9NU02 776 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 MAD1L1Q9Y6D9 718 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 BIRC5O15392 142 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 DENRO43583 198 aaKnown RBP18.43■□□□□ 0.54
CCM2-207ENST00000475551 PFDN1O60925 122 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 COQ9O75208 318 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 DEUP1Q05D60 604 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 TBL3Q12788 808 aaKnown RBP18.43■□□□□ 0.54
CCM2-207ENST00000475551 TAZQ16635 292 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 XKR9Q5GH70 373 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 TAB3Q8N5C8 712 aaPredicted RBP18.43■□□□□ 0.54
CCM2-207ENST00000475551 SAMD3Q8N6K7 520 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 ACTRT2Q8TDY3 377 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 NLRP4Q96MN2 994 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 C20orf27Q9GZN8 174 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 SMYD3Q9H7B4 428 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 ITGA11Q9UKX5 1188 aa18.43■□□□□ 0.54
CCM2-207ENST00000475551 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.42■□□□□ 0.54
CCM2-207ENST00000475551 A0A0B4J269 797 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 STRNO43815 780 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
CCM2-207ENST00000475551 RFPL1O75677 317 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 PGM3O95394 542 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 VNN1O95497 513 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 TFAP2AP05549 437 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 BPGMP07738 259 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 TUBB3Q13509 450 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 NCOA4Q13772 614 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 TRIP10Q15642 601 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 UGCGQ16739 394 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 ACBD5Q5T8D3 534 aaPredicted RBP18.42■□□□□ 0.54
CCM2-207ENST00000475551 LMBRD2Q68DH5 695 aaPredicted RBP18.42■□□□□ 0.54
CCM2-207ENST00000475551 RBM44Q6ZP01 1051 aaKnown RBP18.42■□□□□ 0.54
CCM2-207ENST00000475551 ARCQ7LC44 396 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 ZNF606Q8WXB4 792 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
CCM2-207ENST00000475551 THAP1Q9NVV9 213 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 CCDC195A0A1B0GUA6 201 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 HNRNPDLO14979 420 aaKnown RBP18.42■□□□□ 0.54
CCM2-207ENST00000475551 DESP17661 470 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 TNNI1P19237 187 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 TBXAS1P24557 533 aaPredicted RBP18.42■□□□□ 0.54
CCM2-207ENST00000475551 STX3Q13277 289 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 RABGAP1LQ5R372 815 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 THNSL1Q8IYQ7 743 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 CATSPER2Q96P56 530 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 DEFB129Q9H1M3 183 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 USP29Q9HBJ7 922 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 PLK2Q9NYY3 685 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 TTLL3Q9Y4R7 772 aa18.42■□□□□ 0.54
CCM2-207ENST00000475551 TXNDC9O14530 226 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 CYB561D2O14569 222 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 EXTL3O43909 919 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 COPAP53621 1224 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 SNAPC2Q13487 334 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 DOK7Q18PE1 504 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 RALGPS1Q5JS13 557 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 OGFRL1Q5TC84 451 aaPredicted RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 TMC7Q7Z402 723 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 PPM1NQ8N819 430 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 BSNDQ8WZ55 320 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 PPP1R14BQ96C90 147 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 SUDS3Q9H7L9 328 aaPredicted RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 CDH22Q9UJ99 828 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 ZNF510Q9Y2H8 683 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 MYH9P35579 1960 aaKnown RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 LSM8O95777 96 aaKnown RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 CLPTM1O96005 669 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 RAG1P15918 1043 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 FDFT1P37268 417 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 HIRAP54198 1017 aaPredicted RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 HSP90AA5PQ58FG0 334 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 KLHDC10Q6PID8 442 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 C1orf228Q6PIY5 440 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 WDR75Q8IWA0 830 aaKnown RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 CCDC33Q8N5R6 958 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 FAM71DQ8N9W8 422 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 ZFRQ96KR1 1074 aaKnown RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 RBM38Q9H0Z9 239 aaKnown RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 TIMMDC1Q9NPL8 285 aa18.41■□□□□ 0.54
CCM2-207ENST00000475551 ZNF277Q9NRM2 450 aaPredicted RBP18.41■□□□□ 0.54
CCM2-207ENST00000475551 KRT7P08729 469 aa18.4■□□□□ 0.54
CCM2-207ENST00000475551 SLC25A11Q02978 314 aaKnown RBP18.4■□□□□ 0.54
CCM2-207ENST00000475551 KCNJ11Q14654 390 aa18.4■□□□□ 0.54
CCM2-207ENST00000475551 DBN1Q16643 649 aa18.4■□□□□ 0.54
CCM2-207ENST00000475551 TKFCQ3LXA3 575 aa18.4■□□□□ 0.54
CCM2-207ENST00000475551 WDR78Q5VTH9 848 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms