RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 NINJ2Q9NZG7 142 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 SRRDQ9UH36 339 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 DDX20Q9UHI6 824 aaKnown RBP16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 MDM4O15151 490 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 ZNF623O75123 536 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 RBP3P10745 1247 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 RDXP35241 583 aaKnown RBP16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 CDR1P51861 262 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 ADIGQ0VDE8 80 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 LPIN1Q14693 890 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 NPNTQ6UXI9 565 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 PCGF5Q86SE9 256 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 STMN4Q9H169 189 aaPredicted RBP16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 PCDH18Q9HCL0 1135 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 CALCOCO1Q9P1Z2 691 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 TIMM13Q9Y5L4 95 aaPredicted RBP16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 CABYRO75952 493 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 MAGEA4P43358 317 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 DEFB115Q30KQ5 88 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 ERMARDQ5T6L9 678 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 RNASEH2BQ5TBB1 312 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 DARS2Q6PI48 645 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 UNC45BQ8IWX7 931 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 REM2Q8IYK8 340 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 CENPIQ92674 756 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 FAM149B1Q96BN6 582 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 C9orf72Q96LT7 481 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 ADAM2Q99965 735 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 C11orf84Q9BUA3 381 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 LRRC4Q9HBW1 653 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 A0A0U1RQF3 1178 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 BEST1O76090 585 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 AGTP01019 485 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 POMCP01189 267 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 ACLYP53396 1101 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 ROR1Q01973 937 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 PPARDQ03181 441 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 NOMO1Q15155 1222 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 CA9Q16790 459 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 ANKRD20A8PQ5CZ79 823 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 PPP6R3Q5H9R7 873 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 KIAA0319Q5VV43 1072 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 C1orf228Q6PIY5 440 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 PAQR9Q6ZVX9 377 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 ZC3H18Q86VM9 953 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 FAM71DQ8N9W8 422 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 C3orf58Q8NDZ4 430 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 PGBD4Q96DM1 585 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 SYT15Q9BQS2 421 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 SAYSD1Q9NPB0 183 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 SHOC2Q9UQ13 582 aa16.03■□□□□ 0.16
RPUSD3-215ENST00000475470 APOL1O14791 398 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 FAM200BP0CF97 657 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 IL4RP24394 825 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 LSP1P33241 339 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 DSC3Q14574 896 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 UPP1Q16831 310 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 LONRF1Q17RB8 773 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 CLEC20AQ6ZU45 233 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 CD99L2Q8TCZ2 262 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 BCAS4Q8TDM0 211 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 NDRG1Q92597 394 aaKnown RBP16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 PAAF1Q9BRP4 392 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 CRTAC1Q9NQ79 661 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 SLC12A6Q9UHW9 1150 aa16.02■□□□□ 0.16
RPUSD3-215ENST00000475470 H7C0C1 242 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 RPL22P35268 128 aaKnown RBP16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 MATKP42679 507 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 ATP5OP48047 213 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 ATXN1P54253 815 aaKnown RBP16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 BCAR1P56945 870 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 MAP3K7CLP57077 242 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 IFI35P80217 286 aaPredicted RBP16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 MRPS5P82675 430 aaKnown RBP16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 AUHQ13825 339 aaKnown RBP16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 VSIG1Q86XK7 387 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 DEFB106AQ8N104 65 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 SIX6OS1Q8N1H7 587 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 PLD5Q8N7P1 536 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 RAET1EQ8TD07 263 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 KCTD13Q8WZ19 329 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 ZNF670Q9BS34 389 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 RABEP2Q9H5N1 569 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 DHX35Q9H5Z1 703 aaKnown RBP16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 CNOT10Q9H9A5 744 aaKnown RBP16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 KRT82Q9NSB4 513 aa16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 CWC15Q9P013 229 aaKnown RBP16.02■□□□□ 0.15
RPUSD3-215ENST00000475470 TRPA1O75762 1119 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 SKIP12755 728 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 TGM2P21980 687 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 STIP1P31948 543 aaKnown RBP16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 FAM26DQ5JW98 314 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 MAP3K21Q5TCX8 1036 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 MFSD5Q6N075 450 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 STRADAQ7RTN6 431 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 PPIL6Q8IXY8 311 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 PCDH19Q8TAB3 1148 aa16.01■□□□□ 0.15
RPUSD3-215ENST00000475470 PRCCQ92733 491 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms