RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 C11orf21Q9P2W6 132 aa6.63□□□□□ -1.35
TM9SF3-204ENST00000475401 PCDHGB2Q9Y5G2 931 aa6.63□□□□□ -1.35
TM9SF3-204ENST00000475401 PODXLO00592 558 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 PMPCBO75439 489 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 JTBO76095 146 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 TJP3O95049 919 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 HNRNPCP07910 306 aaKnown RBP eCLIP6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 SETSIPP0DME0 302 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 MYCLP12524 364 aaPredicted RBP6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 ABCB4P21439 1286 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 CTGFP29279 349 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 TECP42680 631 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 HSPA7P48741 367 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 CLCA4Q14CN2 919 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 SUMO4Q6EEV6 95 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 DPY19L3Q6ZPD9 716 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 SYTL1Q8IYJ3 562 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 C11orf44Q8N8P7 122 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 BOLLQ8N9W6 283 aaKnown RBP6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 MBD3L2Q8NHZ7 208 aaPredicted RBP6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 KIAA1191Q96A73 305 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 SARAFQ96BY9 339 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 PRR25Q96S07 402 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 PCDHAC1Q9H158 963 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 TM7SF3Q9NS93 570 aa6.62□□□□□ -1.35
TM9SF3-204ENST00000475401 SPATA31A6Q5VVP1 1343 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 KCNQ3O43525 872 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 TMPRSS11DO60235 418 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 NDST3O95803 873 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 YY1P25490 414 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 NTSR1P30989 418 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 HTR3AP46098 478 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 STARD3Q14849 445 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 SMN1Q16637 294 aaKnown RBP6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 XRRA1Q6P2D8 792 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 FBXO42Q6P3S6 717 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 TOGARAM2Q6ZUX3 1019 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 PTCHD4Q6ZW05 846 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 AMIGO2Q86SJ2 522 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 TTC30AQ86WT1 665 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 CCDC28AQ8IWP9 274 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 GRAMD1AQ96CP6 724 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 RGL1Q9NZL6 768 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 RIMKLBQ9ULI2 386 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 ZMYND8Q9ULU4 1186 aaPredicted RBP6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 MAGED2Q9UNF1 606 aaPredicted RBP6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 SLC27A6Q9Y2P4 619 aa6.61□□□□□ -1.35
TM9SF3-204ENST00000475401 FAM234BA2RU67 622 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 A8MVJ9 347 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 EGR1P18146 543 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 SLC5A2P31639 672 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 CLK3P49761 638 aaKnown RBP6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 RHBDL3P58872 404 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 EIF4A1P60842 406 aaKnown RBP6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 BIRC2Q13490 618 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 CYP1B1Q16678 543 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 MPEG1Q2M385 716 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 TMEM63BQ5T3F8 832 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 ARL6IP4Q66PJ3 421 aaKnown RBP6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 C1orf228Q6PIY5 440 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 NAPRTQ6XQN6 538 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 RD3Q7Z3Z2 195 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 ADGRG3Q86Y34 549 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 SFTPA1Q8IWL2 248 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 CYP2W1Q8TAV3 490 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 MUL1Q969V5 352 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 DAZAP1Q96EP5 407 aaKnown RBP6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 ALG13Q9NP73 1137 aaKnown RBP6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 NECTIN3Q9NQS3 549 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 SH3BP4Q9P0V3 963 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 FNIP2Q9P278 1114 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 MGAT4CQ9UBM8 478 aa6.6□□□□□ -1.35
TM9SF3-204ENST00000475401 A0A087WZ62 844 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 ADAMTS3O15072 1205 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 ZSCAN9O15535 394 aaPredicted RBP6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 EXOC3O60645 756 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 PROP1O75360 226 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 IGLV2-14P01704 120 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 TMEM225BP0DP42 221 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 GABRB3P28472 473 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 PPM1AP35813 382 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 NSUN2Q08J23 767 aaKnown RBP eCLIP6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 MAPKAPK3Q16644 382 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 SLC5A9Q2M3M2 681 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 ZNF362Q5T0B9 420 aaPredicted RBP6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 USP49Q70CQ1 688 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 MYLK4Q86YV6 388 aaPredicted RBP6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 P3H2Q8IVL5 708 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 GLIS1Q8NBF1 620 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 ZNF384Q8TF68 577 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 BBC3Q96PG8 261 aaPredicted RBP6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 CRAMP1Q96RY5 1269 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 ARPP21Q9UBL0 812 aaPredicted RBP6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 VPS51Q9UID3 782 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 SLC39A10Q9ULF5 831 aa6.59□□□□□ -1.35
TM9SF3-204ENST00000475401 TARM1B6A8C7 271 aa6.58□□□□□ -1.36
TM9SF3-204ENST00000475401 AGPSO00116 658 aa6.58□□□□□ -1.36
TM9SF3-204ENST00000475401 PLA2G6O60733 806 aa6.58□□□□□ -1.36
TM9SF3-204ENST00000475401 VIPP01282 170 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms