RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CENPIQ92674 756 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-210ENST00000475329 RNF25Q96BH1 459 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-210ENST00000475329 ACSF2Q96CM8 615 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-210ENST00000475329 RUNDC3BQ96NL0 473 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 PNKPQ96T60 521 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 C11orf84Q9BUA3 381 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-210ENST00000475329 TRIM62Q9BVG3 475 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 HERC2P3Q9BVR0 1158 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 POPDC2Q9HBU9 364 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.36□□□□□ -0.112e-6■□□□□ 11.3
TRAF4-210ENST00000475329 RAB21Q9UL25 225 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 TCRBV7S2A1N4TA0A589 114 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 LTFP02788 710 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 H2AFXP16104 143 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-210ENST00000475329 CHRNA3P32297 505 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 ARPP19P56211 112 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 GPR17Q13304 367 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 SIX1Q15475 284 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-210ENST00000475329 PSMD5Q16401 504 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 CYP1B1Q16678 543 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 SLC25A52Q3SY17 297 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 DCAF6Q58WW2 860 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 PM20D1Q6GTS8 502 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 PRSS55Q6UWB4 352 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-210ENST00000475329 MFSD7Q6UXD7 560 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 ZNF365Q70YC5 407 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 C16orf59Q7L2K0 433 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 STRADAQ7RTN6 431 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 TAS1R1Q7RTX1 841 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 PRELID2Q8N945 189 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 C12orf50Q8NA57 414 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-210ENST00000475329 SPPL2BQ8TCT7 592 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 RIN2Q8WYP3 895 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-210ENST00000475329 PIK3R5Q8WYR1 880 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 RAPGEF5Q92565 580 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 HSPH1Q92598 858 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 TMEM169Q96HH4 297 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 C8orf48Q96LL4 319 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 PEBP4Q96S96 227 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 TBCBQ99426 244 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 VN1R3Q9BXE9 311 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 CHST7Q9NS84 486 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 SPG21Q9NZD8 308 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 STIM2Q9P246 746 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 MTRRQ9UBK8 725 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 NR2E1Q9Y466 385 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 BACE2Q9Y5Z0 518 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 USP3Q9Y6I4 520 aa14.35□□□□□ -0.11
TRAF4-210ENST00000475329 hCG_1818297A0A087WSY0 165 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 MTMR11A4FU01 709 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 YJEFN3A6XGL0 299 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 E7ENQ6 273 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 CAPN9O14815 690 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 RAD51CO43502 376 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 SOD2P04179 222 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 RARAP10276 462 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-210ENST00000475329 KDELR1P24390 212 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 PPM1AP35813 382 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 CDKN2BP42772 138 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 GLUD2P49448 558 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 SLC5A3P53794 718 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 HDAC4P56524 1084 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 KLF1Q13351 362 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-210ENST00000475329 BRD3Q15059 726 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 RAB6CQ53S08 254 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 BOLA3Q53S33 107 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 TFDP3Q5H9I0 405 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 KCNT1Q5JUK3 1230 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 KIAA1841Q6NSI8 718 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 WDR93Q6P2C0 686 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 SCYL2Q6P3W7 929 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 FBXO38Q6PIJ6 1188 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 HFE2Q6ZVN8 426 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 CYP4V2Q6ZWL3 525 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-210ENST00000475329 BHLHA9Q7RTU4 235 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 MAATS1Q7Z4T9 603 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 KCTD6Q8NC69 237 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 CMASQ8NFW8 434 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-210ENST00000475329 MAGOHBQ96A72 148 aaKnown RBP14.34□□□□□ -0.11
TRAF4-210ENST00000475329 PGLYRP2Q96PD5 576 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 NPY6RQ99463 290 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 HEMGNQ9BXL5 484 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 RAB6CQ9H0N0 254 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 AAASQ9NRG9 546 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 HOMER3Q9NSC5 361 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRAF4-210ENST00000475329 RRN3Q9NYV6 651 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 PCDH10Q9P2E7 1040 aa14.34□□□□□ -0.11
TRAF4-210ENST00000475329 CCDC151A5D8V7 595 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 C3orf70A6NLC5 250 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-210ENST00000475329 TNFRSF10BO14763 440 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 MDM4O15151 490 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 ERLIN1O75477 346 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 HEXIM1O94992 359 aaKnown RBP14.33□□□□□ -0.12
TRAF4-210ENST00000475329 TJP3O95049 919 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 RDXP35241 583 aaKnown RBP14.33□□□□□ -0.12
TRAF4-210ENST00000475329 FNTAP49354 379 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 VSNL1P62760 191 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 HTRA4P83105 476 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms