RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 CYLDQ9NQC7 956 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 TLR8Q9NR97 1041 aaKnown RBP16.69■□□□□ 0.26
CDPF1-205ENST00000474256 RAB20Q9NX57 234 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 EBF1Q9UH73 591 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 SCML2Q9UQR0 700 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 PCDHA5Q9Y5H7 936 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 CEP250Q9BV73 2442 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 CACNA1AO00555 2505 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 A0A0A0MRY4 1105 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 SLC16A3O15427 465 aaKnown RBP16.68■□□□□ 0.26
CDPF1-205ENST00000474256 TLR5O60602 858 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
CDPF1-205ENST00000474256 SMC2O95347 1197 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 ADH1CP00326 375 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 SDHBP21912 280 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 SLC6A11P48066 632 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
CDPF1-205ENST00000474256 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
CDPF1-205ENST00000474256 LY6G5CQ5SRR4 150 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 ANKRD40Q6AI12 368 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 DGLUCYQ7Z3D6 616 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 C12orf40Q86WS4 652 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 ERCC4Q92889 916 aaPredicted RBP16.68■□□□□ 0.26
CDPF1-205ENST00000474256 PNKPQ96T60 521 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 SEMA4GQ9NTN9 838 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 OSER1Q9NX31 292 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 SH3BP1Q9Y3L3 701 aa16.68■□□□□ 0.26
CDPF1-205ENST00000474256 HELZP42694 1942 aaKnown RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 ANTXRLA6NF34 631 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 AXIN1O15169 862 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 GREM1O60565 184 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 APBB3O95704 486 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 TBX18O95935 607 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 CHRM1P11229 460 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 ADH5P11766 374 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 ACO1P21399 889 aaKnown RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 CSRP2Q16527 193 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 C2orf27AQ580R0 203 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 PPP1R26Q5T8A7 1209 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 CACNA2D4Q7Z3S7 1137 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 BBS7Q8IWZ6 715 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 ELOA2Q8IYF1 753 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 TTC39CQ8N584 583 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 SMARCE1Q969G3 411 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 WBP2Q969T9 261 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 LOXL4Q96JB6 756 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 ZC3H10Q96K80 434 aaKnown RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 TSG101Q99816 390 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 KLF16Q9BXK1 252 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 DUSP16Q9BY84 665 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 DNAI2Q9GZS0 605 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 NACA2Q9H009 215 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 FAM124BQ9H5Z6 455 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-205ENST00000474256 CISHQ9NSE2 258 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 COQ4Q9Y3A0 265 aa16.67■□□□□ 0.26
CDPF1-205ENST00000474256 CYP26A1O43174 497 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 KAT7O95251 611 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 CCDC192P0DO97 292 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 ATP5C1P36542 298 aaKnown RBP16.66■□□□□ 0.26
CDPF1-205ENST00000474256 KIF11P52732 1056 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 ATXN1P54253 815 aaKnown RBP16.66■□□□□ 0.26
CDPF1-205ENST00000474256 SEC13P55735 322 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 MRPS21P82921 87 aaKnown RBP16.66■□□□□ 0.26
CDPF1-205ENST00000474256 GAD2Q05329 585 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 LRRC63Q05C16 580 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 ZNF394Q53GI3 561 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 KLHDC10Q6PID8 442 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 HTR3DQ70Z44 454 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 KBTBD6Q86V97 674 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 SFTPA1Q8IWL2 248 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 ETFBKMTQ8IXQ9 262 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 PHTF2Q8N3S3 785 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 TMEM176AQ96HP8 235 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 HEXIM2Q96MH2 286 aaKnown RBP16.66■□□□□ 0.26
CDPF1-205ENST00000474256 ARID3AQ99856 593 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 NMUR1Q9HB89 426 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 HOOK1Q9UJC3 728 aaKnown RBP16.66■□□□□ 0.26
CDPF1-205ENST00000474256 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.66■□□□□ 0.26
CDPF1-205ENST00000474256 USP3Q9Y6I4 520 aa16.66■□□□□ 0.26
CDPF1-205ENST00000474256 TRIM49BA6NDI0 452 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
CDPF1-205ENST00000474256 HOXC11O43248 304 aaPredicted RBP16.65■□□□□ 0.26
CDPF1-205ENST00000474256 GRIA2P42262 883 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 RAD23BP54727 409 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 ARHGAP17Q68EM7 881 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 PRR23CQ6ZRP0 262 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 CCDC186Q7Z3E2 898 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 ZNF276Q8N554 614 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 SLC4A11Q8NBS3 891 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 TSTD1Q8NFU3 115 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 TATDN2Q93075 761 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 ARHGEF4Q9NR80 690 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 SPHK2Q9NRA0 654 aa16.65■□□□□ 0.26
CDPF1-205ENST00000474256 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms