RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 UCMAQ8WVF2 138 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 SCG3Q8WXD2 468 aaKnown RBP21.98■■□□□ 1.11
COL18A1-207ENST00000473212 CFAP36Q96G28 342 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.98■■□□□ 1.114e-9■■■□□ 17.3
COL18A1-207ENST00000473212 C19orf81C9J6K1 198 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 GPR25O00155 361 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 TBX10O75333 385 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 TRUB2O95900 331 aaKnown RBP21.98■■□□□ 1.11
COL18A1-207ENST00000473212 FAM102AQ5T9C2 384 aaPredicted RBP21.98■■□□□ 1.11
COL18A1-207ENST00000473212 PAXIP1Q6ZW49 1069 aaPredicted RBP21.98■■□□□ 1.11
COL18A1-207ENST00000473212 DNERQ8NFT8 737 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 CMASQ8NFW8 434 aaPredicted RBP21.98■■□□□ 1.11
COL18A1-207ENST00000473212 FNIP1Q8TF40 1166 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 FAM136AQ96C01 138 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 MECRQ9BV79 373 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 VPS33BQ9H267 617 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 PTPRHQ9HD43 1115 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 TNNC2P02585 160 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 EFNA5P52803 228 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 CDH6P55285 790 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 MXRA7P84157 204 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 ROR1Q01973 937 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 MPZL3Q6UWV2 235 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 RFX8Q6ZV50 586 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 CTAGE3PQ8IX95 158 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 SEPT1Q8WYJ6 367 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 SRPK1Q96SB4 655 aaKnown RBP21.97■■□□□ 1.11
COL18A1-207ENST00000473212 CDT1Q9H211 546 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 ZNF395Q9H8N7 513 aaPredicted RBP21.97■■□□□ 1.11
COL18A1-207ENST00000473212 CENPFP49454 3210 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 EME2A4GXA9 379 aaPredicted RBP21.97■■□□□ 1.11
COL18A1-207ENST00000473212 CXorf49A8MYA2 514 aaPredicted RBP21.97■■□□□ 1.11
COL18A1-207ENST00000473212 TRIM49D1C9J1S8 452 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 COPEO14579 308 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 UGT1A9O60656 530 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 RARBP10826 455 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 CYP3A5P20815 502 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 SLC34A1Q06495 639 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 GRM1Q13255 1194 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 ZNF667Q5HYK9 610 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 MAP1SQ66K74 1059 aaPredicted RBP21.97■■□□□ 1.11
COL18A1-207ENST00000473212 LRRC74BQ6ZQY2 392 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.97■■□□□ 1.113e-14■■■□□ 14.9
COL18A1-207ENST00000473212 ANKRD36BP1Q96IX9 119 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 IQCGQ9H095 443 aaKnown RBP21.97■■□□□ 1.11
COL18A1-207ENST00000473212 UGT1A7Q9HAW7 530 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 UGT1A10Q9HAW8 530 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 UGT1A8Q9HAW9 530 aa21.97■■□□□ 1.11
COL18A1-207ENST00000473212 PROZP22891 400 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 PTPN11Q06124 597 aaPredicted RBP21.96■■□□□ 1.11
COL18A1-207ENST00000473212 KCNJ11Q14654 390 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 ZBTB8OSQ8IWT0 167 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 PPM1NQ8N819 430 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 STMN2Q93045 179 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 FAF2Q96CS3 445 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 MAGEB5Q9BZ81 275 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 LHX5Q9H2C1 402 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 ARHGEF4Q9NR80 690 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 MAP3K13O43283 966 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 IER5Q5VY09 327 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 FAM160B1Q5W0V3 765 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 JADE1Q6IE81 842 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 PDCD7Q8N8D1 485 aaKnown RBP21.96■■□□□ 1.11
COL18A1-207ENST00000473212 DLGAP2Q9P1A6 1054 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 SSC5DA1L4H1 1573 aa21.96■■□□□ 1.11
COL18A1-207ENST00000473212 MCM3APO60318 1980 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 LACTBL1A8MY62 500 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 RNF8O76064 485 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 PGM1P36871 562 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 RGS7P49802 495 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 THOC5Q13769 683 aaKnown RBP21.95■■□□□ 1.1
COL18A1-207ENST00000473212 RCN2Q14257 317 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 CES4AQ5XG92 561 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 SLC26A11Q86WA9 606 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 C12orf29Q8N999 325 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 GGA3Q9NZ52 723 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 GPD2P43304 727 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 IGBP1P78318 339 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 LBRQ14739 615 aaKnown RBP21.95■■□□□ 1.1
COL18A1-207ENST00000473212 DALRD3Q5D0E6 543 aaKnown RBP21.95■■□□□ 1.1
COL18A1-207ENST00000473212 TTC39BQ5VTQ0 682 aaPredicted RBP21.95■■□□□ 1.1
COL18A1-207ENST00000473212 METTL7BQ6UX53 244 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 ADPGKQ9BRR6 497 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 BCO2Q9BYV7 579 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 PLAC1Q9HBJ0 212 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 RAB6BQ9NRW1 208 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 LRCH1Q9Y2L9 728 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 HEY1Q9Y5J3 304 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 NR2E3Q9Y5X4 410 aa21.95■■□□□ 1.1
COL18A1-207ENST00000473212 H7C0C1 242 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 MED7O43513 233 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 B4GALT4O60513 344 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 ZBTB7AO95365 584 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 TOP3BO95985 862 aaKnown RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 STIP1P31948 543 aaKnown RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 ATP5OP48047 213 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 ERFP50548 548 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 OCRLQ01968 901 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 BMPR2Q13873 1038 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 MDH1BQ5I0G3 518 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms