RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SCML2Q9UQR0 700 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 DNAH14Q0VDD8 3507 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 KRBA1A5PL33 1030 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 PIK3R2O00459 728 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 XPO1O14980 1071 aaKnown RBP13.82□□□□□ -0.2
TPM3-216ENST00000473036 TBX18O95935 607 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 SDHBP21912 280 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 DDX6P26196 483 aaKnown RBP eCLIP13.82□□□□□ -0.2
TPM3-216ENST00000473036 GPD2P43304 727 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 PLA2G4AP47712 749 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 RGS7P49802 495 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 BCAT1P54687 386 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 JAM2P57087 298 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 UBXN1Q04323 297 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 FCHO2Q0JRZ9 810 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 BST2Q10589 180 aaKnown RBP13.82□□□□□ -0.2
TPM3-216ENST00000473036 ARHGAP15Q53QZ3 475 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 DGLUCYQ7Z3D6 616 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 MFSD6LQ8IWD5 586 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 ZFYVE19Q96K21 471 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 ZFRQ96KR1 1074 aaKnown RBP13.82□□□□□ -0.2
TPM3-216ENST00000473036 GCNAQ96QF7 691 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 SLC2A4RGQ9NR83 387 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 FAM207AQ9NSI2 230 aaPredicted RBP13.82□□□□□ -0.2
TPM3-216ENST00000473036 COMMD8Q9NX08 183 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 TRPM5Q9NZQ8 1165 aa13.82□□□□□ -0.2
TPM3-216ENST00000473036 A0A1B0GTH6 734 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 A0A1W2PQH9 124 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 SOBPA7XYQ1 873 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 F8VZ95 297 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 M0QYV0 167 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 COCHO43405 550 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 ABL1P00519 1130 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 USP17L7P0C7H9 530 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 RFX1P22670 979 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 GNA15P30679 374 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 USP8P40818 1118 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 RPL34P49207 117 aaKnown RBP13.81□□□□□ -0.2
TPM3-216ENST00000473036 NR1I3Q14994 352 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 ZNF77Q15935 545 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 CCDC186Q7Z3E2 898 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 CLEC4CQ8WTT0 213 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 OVCA2Q8WZ82 227 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 DDX1Q92499 740 aaKnown RBP13.81□□□□□ -0.2
TPM3-216ENST00000473036 RUBCNQ92622 972 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 SLITRK1Q96PX8 696 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 STK33Q9BYT3 514 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 ULBP1Q9BZM6 244 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 TDP1Q9NUW8 608 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 TJP2Q9UDY2 1190 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 NUDT5Q9UKK9 219 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 MYOFQ9NZM1 2061 aa13.81□□□□□ -0.2
TPM3-216ENST00000473036 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 GOLGA6L3A6NEY3 463 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 OTOL1A6NHN0 477 aaPredicted RBP13.8□□□□□ -0.2
TPM3-216ENST00000473036 THAP12O43422 761 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 TPM3P06753 285 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 PSMC3P17980 439 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 HDCP19113 662 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 GDI1P31150 447 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 TKTL1P51854 596 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 POLR2FP61218 127 aaKnown RBP13.8□□□□□ -0.2
TPM3-216ENST00000473036 SLC7A9P82251 487 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 ADIGQ0VDE8 80 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 RAPGEF1Q13905 1077 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 ZNF268Q14587 947 aaPredicted RBP13.8□□□□□ -0.2
TPM3-216ENST00000473036 FKBP15Q5T1M5 1219 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 PM20D1Q6GTS8 502 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 GPR161Q8N6U8 529 aaKnown RBP13.8□□□□□ -0.2
TPM3-216ENST00000473036 KCTD13Q8WZ19 329 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 RMDN1Q96DB5 314 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 CHFRQ96EP1 664 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 FAM81BQ96LP2 452 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 FBXO44Q9H4M3 255 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 NLRC4Q9NPP4 1024 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM3-216ENST00000473036 EHD2Q9NZN4 543 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 CA14Q9ULX7 337 aa13.8□□□□□ -0.2
TPM3-216ENST00000473036 OTOGLQ3ZCN5 2332 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 E7ENQ6 273 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 STK25O00506 426 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
TPM3-216ENST00000473036 MDM4O15151 490 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 CKMP06732 381 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 SETSIPP0DME0 302 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 TRIM21P19474 475 aaKnown RBP13.79□□□□□ -0.2
TPM3-216ENST00000473036 AVPR1AP37288 418 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 PBX1P40424 430 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 PPP3CCP48454 512 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 FANCCQ00597 558 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 TNK2Q07912 1038 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 USP4Q13107 963 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 GSE1Q14687 1217 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 TRIM68Q6AZZ1 485 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 NOP9Q86U38 636 aaKnown RBP13.79□□□□□ -0.2
TPM3-216ENST00000473036 PASD1Q8IV76 773 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 C1orf210Q8IVY1 113 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 CELF5Q8N6W0 485 aaKnown RBP13.79□□□□□ -0.2
TPM3-216ENST00000473036 OLIG1Q8TAK6 271 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms