RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 ESRRBO95718 433 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 TGM1P22735 817 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 PPM1FP49593 454 aaPredicted RBP5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 ALDH18A1P54886 795 aaKnown RBP5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 PUM1Q14671 1186 aaKnown RBP eCLIP5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 ZXDCQ2QGD7 858 aaPredicted RBP5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 KIAA0895LQ68EN5 471 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 IGFL4Q6B9Z1 124 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 Q6YL49 198 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 LRRC71Q8N4P6 559 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 LINC00476Q8WZB0 136 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 RFKQ969G6 155 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 RSPRY1Q96DX4 576 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 MAGEH1Q9H213 219 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 EPS8L2Q9H6S3 715 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 SYBUQ9NX95 663 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 GRHPRQ9UBQ7 328 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 RIMKLBQ9ULI2 386 aa5.65□□□□□ -1.5
PRPF40A-208ENST00000472760 NCANO14594 1321 aa5.65□□□□□ -1.51
PRPF40A-208ENST00000472760 CCDC151A5D8V7 595 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 URI1O94763 535 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 NTSR2O95665 410 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 PRKCBP05771 671 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 ITGA5P08648 1049 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 DLDP09622 509 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 MPLP40238 635 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 SEC24CP53992 1094 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 TPTEP56180 551 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 POLE2P56282 527 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 ABHD18Q0P651 414 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 CLCA4Q14CN2 919 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 TRIM71Q2Q1W2 868 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 ZNF551Q7Z340 670 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 METTL25Q8N6Q8 603 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 MYRIPQ8NFW9 859 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 SUN3Q8TAQ9 357 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 ACTRT2Q8TDY3 377 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 TRAPPC12Q8WVT3 735 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 TRIM36Q9NQ86 728 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 SCAF8Q9UPN6 1271 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 EPN1Q9Y6I3 576 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 COL15A1P39059 1388 aa5.64□□□□□ -1.51
PRPF40A-208ENST00000472760 COL4A3Q01955 1670 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 PNMA6EA0A0J9YXQ4 647 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 TMEM191CA6NGB0 347 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 J3KTA2 159 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 FCHO1O14526 889 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 CREB3O43889 395 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 PMPCBO75439 489 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 WDR47O94967 919 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 TTLL1O95922 423 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 ITGA2BP08514 1039 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 TMEM225BP0DP42 221 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 NDUFB7P17568 137 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 GKP32189 559 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 BUD31P41223 144 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 GRIA3P42263 894 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 EIF4A1P60842 406 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 SUMO2P61956 95 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 FOXO1Q12778 655 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 FHL3Q13643 280 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 PRKG1Q13976 671 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 CRIP3Q6Q6R5 217 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 KLHL17Q6TDP4 642 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 PARS2Q7L3T8 475 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 CCDC117Q8IWD4 279 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 ULK2Q8IYT8 1036 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 NEU4Q8WWR8 484 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 LARP4BQ92615 738 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 EID2BQ96D98 161 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 VPS50Q96JG6 964 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 KATNAL1Q9BW62 490 aa5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 SORBS1Q9BX66 1292 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 HERC5Q9UII4 1024 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-208ENST00000472760 AP4M1O00189 453 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 CES2O00748 559 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 PCDH17O14917 1159 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 KIAA0355O15063 1070 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 DNPH1O43598 174 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 ANXA6P08133 673 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 CREB1P16220 341 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 HTR7P34969 479 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 ADRA1BP35368 520 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 FOXI1Q12951 378 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 RAPGEF1Q13905 1077 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 ST3GAL2Q16842 350 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 TIGD6Q17RP2 521 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 P3H1Q32P28 736 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 TBC1D25Q3MII6 688 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 ATPAF1Q5TC12 328 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 HECTD2Q5U5R9 776 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 SULT6B1Q6IMI4 303 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 RINT1Q6NUQ1 792 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 DPY19L3Q6ZPD9 716 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 USP51Q70EK9 711 aa5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 WDR53Q7Z5U6 358 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-208ENST00000472760 PEG10Q86TG7 708 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms