RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 BRD2P25440 801 aaKnown RBP12.53□□□□□ -0.4
CLRN1-205ENST00000472224 USP8P40818 1118 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 MYL5Q02045 173 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 APBA1Q02410 837 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 ACAP1Q15027 740 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 MLF2Q15773 248 aaPredicted RBP12.53□□□□□ -0.4
CLRN1-205ENST00000472224 ARHGAP44Q17R89 818 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 ANO6Q4KMQ2 910 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 VWA3BQ502W6 1294 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 TCP11X2Q5H9J9 407 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 ARHGAP17Q68EM7 881 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 TRIM65Q6PJ69 517 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 MON1AQ86VX9 555 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 MFSD6LQ8IWD5 586 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 AOPEPQ8N6M6 819 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 CELF5Q8N6W0 485 aaKnown RBP12.53□□□□□ -0.4
CLRN1-205ENST00000472224 UBR7Q8N806 425 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 BPIFB1Q8TDL5 484 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 ATRIPQ8WXE1 791 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 E2F7Q96AV8 911 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 ZFYVE19Q96K21 471 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 KREMEN1Q96MU8 473 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 SLC22A12Q96S37 553 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 CYP2S1Q96SQ9 504 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 DDX23Q9BUQ8 820 aaKnown RBP12.53□□□□□ -0.4
CLRN1-205ENST00000472224 NDST4Q9H3R1 872 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 FAM124BQ9H5Z6 455 aaPredicted RBP12.53□□□□□ -0.4
CLRN1-205ENST00000472224 CSNK1G1Q9HCP0 422 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 UBE2TQ9NPD8 197 aaPredicted RBP12.53□□□□□ -0.4
CLRN1-205ENST00000472224 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 ZMYM5Q9UJ78 669 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
CLRN1-205ENST00000472224 ANKRD11Q6UB99 2663 aaPredicted RBP12.52□□□□□ -0.41
CLRN1-205ENST00000472224 ZNF840PA6NDX5 716 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 TNFRSF10BO14763 440 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 CYP26A1O43174 497 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 VDRP11473 427 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 HDCP19113 662 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 PTMSP20962 102 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 ACO1P21399 889 aaKnown RBP12.52□□□□□ -0.41
CLRN1-205ENST00000472224 EEF1GP26641 437 aaKnown RBP12.52□□□□□ -0.41
CLRN1-205ENST00000472224 PDE6CP51160 858 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 BCAT1P54687 386 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 MFAP3P55082 362 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 SLC8A3P57103 927 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 GCNT1Q02742 428 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 MIIPQ5JXC2 388 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 TSSK4Q6SA08 328 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 PDZD8Q8NEN9 1154 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 TTC8Q8TAM2 541 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 CSGALNACT1Q8TDX6 532 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 IRF7Q92985 503 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 USP13Q92995 863 aaPredicted RBP12.52□□□□□ -0.41
CLRN1-205ENST00000472224 SECISBP2LQ93073 1101 aaKnown RBP12.52□□□□□ -0.41
CLRN1-205ENST00000472224 LSM14BQ9BX40 385 aaKnown RBP12.52□□□□□ -0.41
CLRN1-205ENST00000472224 DUSP16Q9BY84 665 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 NACA2Q9H009 215 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 FBXO44Q9H4M3 255 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 HEBP1Q9NRV9 189 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 TDP1Q9NUW8 608 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 FANCLQ9NW38 375 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 ZSCAN32Q9NX65 697 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 SMPD4Q9NXE4 827 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 CHORDC1Q9UHD1 332 aaPredicted RBP12.52□□□□□ -0.41
CLRN1-205ENST00000472224 TSPAN16Q9UKR8 245 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 MYOFQ9NZM1 2061 aa12.52□□□□□ -0.41
CLRN1-205ENST00000472224 CEP295Q9C0D2 2601 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 KANSL1LA0AUZ9 987 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 SYCE3A1L190 88 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 GTPBP10A4D1E9 387 aaKnown RBP12.51□□□□□ -0.41
CLRN1-205ENST00000472224 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 M0QYV0 167 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
CLRN1-205ENST00000472224 PAEPP09466 180 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 MBL2P11226 248 aaPredicted RBP12.51□□□□□ -0.41
CLRN1-205ENST00000472224 PON1P27169 355 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 PPP3CCP48454 512 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 SPEM2Q0P670 501 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 UBXN2BQ14CS0 331 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 KRT31Q15323 416 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 ARHGAP29Q52LW3 1261 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 SLC44A4Q53GD3 710 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 CDKAL1Q5VV42 579 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 CC2D1AQ6P1N0 951 aaPredicted RBP12.51□□□□□ -0.41
CLRN1-205ENST00000472224 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 ANKRD20A12PQ8NF67 263 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 RIN3Q8TB24 985 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 UBA3Q8TBC4 463 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 SH3RF2Q8TEC5 729 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 TFAP2BQ92481 460 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 DNASE1L2Q92874 299 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 LRRC3BQ96PB8 259 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 NAT10Q9H0A0 1025 aaKnown RBP12.51□□□□□ -0.41
CLRN1-205ENST00000472224 VPS16Q9H269 839 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 THG1LQ9NWX6 298 aaKnown RBP12.51□□□□□ -0.41
CLRN1-205ENST00000472224 OBP2AQ9NY56 170 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms