RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ING3Q9NXR8 418 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 WDR35Q9P2L0 1181 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 COPG2Q9UBF2 871 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SLC12A8A0AV02 714 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PHF20L1A8MW92 1017 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 B2RBV5 119 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ADCY6O43306 1168 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 AGAP9Q5VTM2 703 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 GUF1Q8N442 669 aaKnown RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 UTP15Q8TED0 518 aaKnown RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SH3GL1Q99961 368 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CCDC177Q9NQR7 707 aaPredicted RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 MYH6P13533 1939 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TRAF2Q12933 501 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 EPHX4Q8IUS5 362 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 RNFT2Q96EX2 444 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 RBBP8Q99708 897 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PRRG4Q9BZD6 226 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 RANBP17Q9H2T7 1088 aaKnown RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ELL3Q9HB65 397 aaPredicted RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 AGPAT5Q9NUQ2 364 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.65□□□□□ -0.221e-9■■□□□ 11.4
NPHP3-ACAD11-201ENST00000471702 PAK5Q9P286 719 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PRKAG3Q9UGI9 489 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 GPR182O15218 404 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 RAP1GAPP47736 663 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 AP1S1P61966 158 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 OLFML2AQ68BL7 652 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 GJB7Q6PEY0 223 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 R3HCC1LQ7Z5L2 792 aaKnown RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TMEM39AQ9NV64 488 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 VAV3Q9UKW4 847 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 GOLGA8TH3BQL2 631 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 KLK7P49862 253 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ANXA11P50995 505 aaKnown RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 FBXO16Q8IX29 292 aaPredicted RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 MTFMTQ96DP5 389 aaKnown RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 KCNS3Q9BQ31 491 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 OSBPL5Q9H0X9 879 aaPredicted RBP13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TSC22D4Q9Y3Q8 395 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SCAMP3O14828 347 aaKnown RBP13.65□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 BOP1Q14137 746 aaKnown RBP13.65□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TTC33Q6PID6 262 aaPredicted RBP13.65□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ERP27Q96DN0 273 aa13.65□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ACOX2Q99424 681 aa13.65□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PPP2R3BQ9Y5P8 575 aa13.65□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NUP153P49790 1475 aaKnown RBP13.65□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FLT1P17948 1338 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAM45BPQ6NSW5 357 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PTAR1Q7Z6K3 402 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ATG16L2Q8NAA4 619 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ZSWIM2Q8NEG5 633 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CSGALNACT1Q8TDX6 532 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ZNF70Q9UC06 446 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TRIM43BA6NCK2 446 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 EGFRP00533 1210 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 HOXA7P31268 230 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GRK4P32298 578 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CLCN3P51790 818 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RPS6KA3P51812 740 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NAPEPLDQ6IQ20 393 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CAMKK2Q96RR4 588 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GJA1P17302 382 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SMU1Q2TAY7 513 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SLC9A7Q96T83 725 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MTMR4Q9NYA4 1195 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SMIM31A0A1B0GVY4 71 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 H7C4K7 107 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NR5A2O00482 541 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CPA3P15088 417 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MAGEA9P43362 315 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 STRIP1Q5VSL9 837 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ANKRD13AQ8IZ07 590 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 IRX2Q9BZI1 471 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RGS18Q9NS28 235 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NPHP4O75161 1426 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 OPLAHO14841 1288 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KCNA3P22001 575 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SRSF11Q05519 484 aaKnown RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ARMC4Q5T2S8 1044 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MRNIPQ6NTE8 343 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 DSG4Q86SJ6 1040 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GMCL1Q96IK5 515 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CNPPD1Q9BV87 410 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FBXO28Q9NVF7 368 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PRMT7Q9NVM4 692 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PGM3O95394 542 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ALDH2P05091 517 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 LRRC74BQ6ZQY2 392 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KRT73Q86Y46 540 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAR1Q8WVX9 515 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GRAMD1AQ96CP6 724 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GRID1Q9ULK0 1009 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CDY2AQ9Y6F7 541 aa13.64□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CDY1Q9Y6F8 540 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 269.4 ms