RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 RRP9O43818 475 aaKnown RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 PIAS2O75928 621 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 ZKSCAN1P17029 563 aaPredicted RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 KLRC1P26715 233 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 HOXD9P28356 352 aaPredicted RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 TIRAPP58753 221 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 LARS2Q15031 903 aaKnown RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 RBMS2Q15434 407 aaKnown RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 C3orf38Q5JPI3 329 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 DCDC5Q6ZRR9 648 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 MRPL10Q7Z7H8 261 aaKnown RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 RAVER1Q8IY67 606 aaKnown RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 C16orf52Q8NHV5 167 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 MAFAQ8NHW3 353 aaPredicted RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 PIGOQ8TEQ8 1089 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 PNISRQ8TF01 805 aaKnown RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 TRIM43Q96BQ3 446 aaPredicted RBP4.65□□□□□ -1.67
RBM39-228ENST00000471635 CTHRC1Q96CG8 243 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 COQ8BQ96D53 544 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 HS6ST2Q96MM7 605 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 MTMR4Q9NYA4 1195 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 MGAT4CQ9UBM8 478 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 CCP110O43303 1012 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 PRPF3O43395 683 aaKnown RBP4.64□□□□□ -1.67
RBM39-228ENST00000471635 CYP19A1P11511 503 aaPredicted RBP4.64□□□□□ -1.67
RBM39-228ENST00000471635 PGDP52209 483 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 TIAL1Q01085 375 aaKnown RBP eCLIP4.64□□□□□ -1.672e-7■□□□□ 10.8
RBM39-228ENST00000471635 ZNF91Q05481 1191 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 STK3Q13188 491 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 ARHGEF7Q14155 803 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 C4orf46Q504U0 113 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 CXorf57Q6NSI4 855 aaKnown RBP4.64□□□□□ -1.67
RBM39-228ENST00000471635 IRF2BP2Q7Z5L9 587 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 KIAA0319LQ8IZA0 1049 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 LINC01465Q8N7H1 131 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 ZNF398Q8TD17 642 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 MAP4K1Q92918 833 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 WDYHV1Q96HA8 205 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 PI4KBQ9UBF8 816 aa4.64□□□□□ -1.67
RBM39-228ENST00000471635 THRAP3Q9Y2W1 955 aaKnown RBP4.64□□□□□ -1.67
RBM39-228ENST00000471635 AGPSO00116 658 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 RAB27BO00194 218 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 EXOC5O00471 708 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 TMPRSS11DO60235 418 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 PRF1P14222 555 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 GATMP50440 423 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 FOXG1P55316 489 aaPredicted RBP4.63□□□□□ -1.67
RBM39-228ENST00000471635 RPS16P62249 146 aaKnown RBP4.63□□□□□ -1.67
RBM39-228ENST00000471635 SLC29A2Q14542 456 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 KCNB1Q14721 858 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 SEC23BQ15437 767 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 TRIM71Q2Q1W2 868 aaKnown RBP4.63□□□□□ -1.67
RBM39-228ENST00000471635 ZNF750Q32MQ0 723 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 ODR4Q5SWX8 454 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 CC2D1BQ5T0F9 858 aaKnown RBP4.63□□□□□ -1.67
RBM39-228ENST00000471635 CHPFQ8IZ52 775 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 FAM177A1Q8N128 213 aaPredicted RBP4.63□□□□□ -1.67
RBM39-228ENST00000471635 NMD3Q96D46 503 aaKnown RBP4.63□□□□□ -1.67
RBM39-228ENST00000471635 TMEM184CQ9NVA4 438 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 AFF4Q9UHB7 1163 aaKnown RBP4.63□□□□□ -1.67
RBM39-228ENST00000471635 ASAP1Q9ULH1 1129 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 TPCN1Q9ULQ1 816 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 L1RE1Q9UN81 338 aa4.63□□□□□ -1.67
RBM39-228ENST00000471635 A6NNZ2 444 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 MCM5P33992 734 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 NPY5RQ15761 445 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 CNGA2Q16280 664 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 MINDY4Q4G0A6 757 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 ARHGAP29Q52LW3 1261 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 C10orf25Q5T742 122 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 RANBP10Q6VN20 620 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 C11orf44Q8N8P7 122 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.62□□□□□ -1.67
RBM39-228ENST00000471635 SIGLEC11Q96RL6 698 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 FOXP1Q9H334 677 aaPredicted RBP4.62□□□□□ -1.67
RBM39-228ENST00000471635 C1orf112Q9NSG2 853 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 MID2Q9UJV3 735 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 ITGB1BP2Q9UKP3 347 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 RIMKLBQ9ULI2 386 aa4.62□□□□□ -1.67
RBM39-228ENST00000471635 MYMKA6NI61 221 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 ISM1B1AKI9 464 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 SCGB1D2O95969 90 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 TMEM191BP0C7N4 346 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 U2AF1L5P0DN76 240 aaPredicted RBP4.61□□□□□ -1.67
RBM39-228ENST00000471635 SNHG28P0DPA3 235 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 ACVR2AP27037 513 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 NTSR1P30989 418 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 CCKBRP32239 447 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 CPT1AP50416 773 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 U2AF1Q01081 240 aaKnown RBP eCLIP4.61□□□□□ -1.67
RBM39-228ENST00000471635 ID2Q02363 134 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 DEUP1Q05D60 604 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 MFSD13AQ14CX5 517 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 FAM102BQ5T8I3 360 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 VSTM1Q6UX27 236 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 ZNF517Q6ZMY9 492 aaPredicted RBP4.61□□□□□ -1.67
RBM39-228ENST00000471635 LIX1LQ8IVB5 337 aa4.61□□□□□ -1.67
RBM39-228ENST00000471635 C16orf71Q8IYS4 520 aaPredicted RBP4.61□□□□□ -1.67
RBM39-228ENST00000471635 METTL25Q8N6Q8 603 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms