RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ZBED1O96006 694 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 LCP1P13796 627 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 TCF3P15923 654 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 BPIFB4P59827 614 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 PM20D1Q6GTS8 502 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 PASD1Q8IV76 773 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 YAF2Q8IY57 180 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 SIX6OS1Q8N1H7 587 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 NDRG1Q92597 394 aaKnown RBP20.77■□□□□ 0.92
HDAC7-220ENST00000471235 HSFY1Q96LI6 401 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 SPAG5Q96R06 1193 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 BRD9Q9H8M2 597 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 CYLDQ9NQC7 956 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 NAGPAQ9UK23 515 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 FBXL21Q9UKT6 434 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 CPQQ9Y646 472 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 A0A1W2PQC6 194 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 ARNTLO00327 626 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 PIK3R2O00459 728 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 GFPT2O94808 682 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 MBL2P11226 248 aaPredicted RBP20.76■□□□□ 0.91
HDAC7-220ENST00000471235 CYP11B1P15538 503 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 SOX5P35711 763 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 RPL34P49207 117 aaKnown RBP20.76■□□□□ 0.91
HDAC7-220ENST00000471235 ZXDBP98169 803 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 NR1I3Q14994 352 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 IER5LQ5T953 404 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 SCML4Q8N228 414 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 SH3RF2Q8TEC5 729 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 DNASE1L2Q92874 299 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 ZFYVE19Q96K21 471 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 ZFRQ96KR1 1074 aaKnown RBP20.76■□□□□ 0.91
HDAC7-220ENST00000471235 CNGB3Q9NQW8 809 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.76■□□□□ 0.91
HDAC7-220ENST00000471235 SMPD4Q9NXE4 827 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 WNT16Q9UBV4 365 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 CA14Q9ULX7 337 aa20.76■□□□□ 0.91
HDAC7-220ENST00000471235 LEFTY2O00292 366 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 ZNF263O14978 683 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 CHADO15335 359 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 RARGP13631 454 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 STAT1P42224 750 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 PSEN1P49768 467 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 DAOAP59103 153 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 YWHAGP61981 247 aaKnown RBP eCLIP20.75■□□□□ 0.91
HDAC7-220ENST00000471235 PFKPQ01813 784 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 PDCLQ13371 301 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 MTF1Q14872 753 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 ARHGAP29Q52LW3 1261 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 NOP9Q86U38 636 aaKnown RBP20.75■□□□□ 0.91
HDAC7-220ENST00000471235 ARHGAP18Q8N392 663 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 RNF214Q8ND24 703 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 EPS8L1Q8TE68 723 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 CLEC4CQ8WTT0 213 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 STK32AQ8WU08 396 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 DDX1Q92499 740 aaKnown RBP20.75■□□□□ 0.91
HDAC7-220ENST00000471235 ARHGEF3Q9NR81 526 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 CLIC5Q9NZA1 410 aa20.75■□□□□ 0.91
HDAC7-220ENST00000471235 KRBA1A5PL33 1030 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 PDGFBP01127 241 aaPredicted RBP20.74■□□□□ 0.91
HDAC7-220ENST00000471235 KRT9P35527 623 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 UBASH3AP57075 661 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 TAF3Q5VWG9 929 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 SIX5Q8N196 739 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 WDTC1Q8N5D0 677 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 C1orf131Q8NDD1 294 aaKnown RBP20.74■□□□□ 0.91
HDAC7-220ENST00000471235 TTC16Q8NEE8 873 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 IRF7Q92985 503 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 C1QTNF1Q9BXJ1 281 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 SLC4A5Q9BY07 1137 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 NACA2Q9H009 215 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 LHX5Q9H2C1 402 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 ST7Q9NRC1 585 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 IFNKQ9P0W0 207 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 NOCTQ9UK39 431 aaKnown RBP20.74■□□□□ 0.91
HDAC7-220ENST00000471235 NUDT5Q9UKK9 219 aa20.74■□□□□ 0.91
HDAC7-220ENST00000471235 YJEFN3A6XGL0 299 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 E7ENQ6 273 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 MDM4O15151 490 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 GPR37L1O60883 481 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 TBX18O95935 607 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 RALAP11233 206 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 PBX1P40424 430 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 ACADSBP45954 432 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 PLCB2Q00722 1185 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 KLHDC10Q6PID8 442 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 CACNA2D4Q7Z3S7 1137 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 DDX42Q86XP3 938 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC7-220ENST00000471235 ZNF276Q8N554 614 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 SLC20A1Q8WUM9 679 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 IRGQQ8WZA9 623 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 BAP1Q92560 729 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 TRPV5Q9NQA5 729 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 THG1LQ9NWX6 298 aaKnown RBP20.73■□□□□ 0.91
HDAC7-220ENST00000471235 TJP2Q9UDY2 1190 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 ZNF318Q5VUA4 2279 aa20.73■□□□□ 0.91
HDAC7-220ENST00000471235 E5RJQ4 531 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 FBXO21O94952 628 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 ATP5C1P36542 298 aaKnown RBP20.72■□□□□ 0.91
HDAC7-220ENST00000471235 MLF2Q15773 248 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms