RNA–Protein interactions for RNA: ENST00000470903.5

NVL-213, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-213	ENST00000470903	GPS1	Q13098	491 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	BMPR2	Q13873	1038 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	CLCA4	Q14CN2	919 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	PUM3	Q15397	648 aa	Known RBP	4.87	□□□□□ -1.63
NVL-213	ENST00000470903	GORAB	Q5T7V8	394 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	ERAP2	Q6P179	960 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	FBXO42	Q6P3S6	717 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	RAB11FIP4	Q86YS3	637 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.87	□□□□□ -1.63
NVL-213	ENST00000470903	RFK	Q969G6	155 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	C18orf8	Q96DM3	657 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	C17orf80	Q9BSJ5	609 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.87	□□□□□ -1.63	1e-10	■□□□□ 9
NVL-213	ENST00000470903	R3HDML	Q9H3Y0	253 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	AS3MT	Q9HBK9	375 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.87	□□□□□ -1.63
NVL-213	ENST00000470903	USP22	Q9UPT9	525 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	RIPOR2	Q9Y4F9	1068 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.87	□□□□□ -1.63
NVL-213	ENST00000470903	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.87	□□□□□ -1.63
NVL-213	ENST00000470903	SPATA31A6	Q5VVP1	1343 aa		4.87	□□□□□ -1.63
NVL-213	ENST00000470903	OR2W5	A6NFC9	320 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903		M0R3H8	397 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	ORC4	O43929	436 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	CCNT2	O60583	730 aa	Known RBP	4.86	□□□□□ -1.63
NVL-213	ENST00000470903	SNX2	O60749	519 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	URI1	O94763	535 aa	Predicted RBP	4.86	□□□□□ -1.63
NVL-213	ENST00000470903	GLP2R	O95838	553 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	PRKCB	P05771	671 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	IL6R	P08887	468 aa	Predicted RBP	4.86	□□□□□ -1.63
NVL-213	ENST00000470903	AR	P10275	920 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	RBL1	P28749	1068 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	LIPA	P38571	399 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	MPL	P40238	635 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	GATM	P50440	423 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	TIRAP	P58753	221 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	BLMH	Q13867	455 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	PRR16	Q569H4	304 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	PLAC9	Q5JTB6	97 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	TREML2	Q5T2D2	321 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	KAZN	Q674X7	775 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	RAP1GAP2	Q684P5	730 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	SLC9A4	Q6AI14	798 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	ACTRT2	Q8TDY3	377 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	IPO4	Q8TEX9	1081 aa	Known RBP	4.86	□□□□□ -1.63
NVL-213	ENST00000470903	HIST1H2AA	Q96QV6	131 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	PTPRH	Q9HD43	1115 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	LRIT1	Q9P2V4	623 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	RIMKLB	Q9ULI2	386 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	DRG1	Q9Y295	367 aa	Known RBP	4.86	□□□□□ -1.63
NVL-213	ENST00000470903	COL15A1	P39059	1388 aa		4.86	□□□□□ -1.63
NVL-213	ENST00000470903	POLR2A	P24928	1970 aa	Known RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	PSMD9	O00233	223 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	SYT5	O00445	386 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	TJP3	O95049	919 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	NR2F6	P10588	404 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	PCSK6	P29122	969 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	PDIA3	P30101	505 aa	Known RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	GRIA3	P42263	894 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	CLCN2	P51788	898 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	ELL	P55199	621 aa	Predicted RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	TPTE	P56180	551 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	FOXI1	Q12951	378 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	ATP1A4	Q13733	1029 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	SPARCL1	Q14515	664 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	PDCD2	Q16342	344 aa	Predicted RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	LY6K	Q17RY6	165 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	ZACN	Q401N2	412 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	TMTC4	Q5T4D3	741 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	ABLIM2	Q6H8Q1	611 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	USP49	Q70CQ1	688 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	ZNF551	Q7Z340	670 aa	Predicted RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	PEG10	Q86TG7	708 aa	Known RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	CAND1	Q86VP6	1230 aa	Known RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	RP9	Q8TA86	221 aa	Known RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	FAM71B	Q8TC56	605 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	ABHD5	Q8WTS1	349 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	TFAP2B	Q92481	460 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	R3HDM4	Q96D70	268 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	ZBTB45	Q96K62	511 aa	Predicted RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	RMDN3	Q96TC7	470 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	MYH16	Q9H6N6	1097 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	DKK3	Q9UBP4	350 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	GABRQ	Q9UN88	632 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	DTNA	Q9Y4J8	743 aa		4.85	□□□□□ -1.63
NVL-213	ENST00000470903	COL11A2	P13942	1736 aa	Predicted RBP	4.85	□□□□□ -1.63
NVL-213	ENST00000470903	hCG_1642624	A0A1W2PR95	340 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	AGPS	O00116	658 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	NPC1	O15118	1278 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	CSTB	P04080	98 aa	Known RBP	4.84	□□□□□ -1.63
NVL-213	ENST00000470903	ERBB2	P04626	1255 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	FES	P07332	822 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	CD19	P15391	556 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	PECAM1	P16284	738 aa	Predicted RBP	4.84	□□□□□ -1.63
NVL-213	ENST00000470903	TYRP1	P17643	537 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	HTR7	P34969	479 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	TRIM14	Q14142	442 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	PTK2B	Q14289	1009 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	CCDC38	Q502W7	563 aa		4.84	□□□□□ -1.63
NVL-213	ENST00000470903	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms