RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PTPN9P43378 593 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 ARSEP51690 589 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 ARPP19P56211 112 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 YWHAZP63104 245 aaKnown RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 HTRA4P83105 476 aaPredicted RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 BTG3Q14201 252 aaPredicted RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 CA9Q16790 459 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 SPATA2LQ8IUW3 424 aaPredicted RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 GPR161Q8N6U8 529 aaKnown RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 COLGALT1Q8NBJ5 622 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 CMASQ8NFW8 434 aaPredicted RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 EXD1Q8NHP7 514 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 FAM172AQ8WUF8 416 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 ATG4AQ8WYN0 398 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 FAM149B1Q96BN6 582 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 SLC2A13Q96QE2 648 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 NPY6RQ99463 290 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 FAM118BQ9BPY3 351 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 CLSTN3Q9BQT9 956 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 NGRNQ9NPE2 291 aaKnown RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 DMAP1Q9NPF5 467 aaPredicted RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 GPATCH2LQ9NWQ4 482 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 AMACRQ9UHK6 382 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 SLC27A5Q9Y2P5 690 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 NUP205Q92621 2012 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 GBF1Q92538 1859 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ARHGEF37A1IGU5 675 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 WDR27A2RRH5 827 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 MTMR11A4FU01 709 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 C2CD2LO14523 706 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 HSF2BPO75031 334 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ENDOD1O94919 500 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ARHGEF15O94989 841 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ZBED1O96006 694 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 FGBP02675 491 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 CAPN2P17655 700 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 IL4RP24394 825 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 SDC4P31431 198 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 SLC5A3P53794 718 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 FPGSQ05932 587 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 MMRN1Q13201 1228 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 GPR17Q13304 367 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ACAP1Q15027 740 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 MAPRE1Q15691 268 aaKnown RBP8.71□□□□□ -1.02
GTF3A-206ENST00000470606 TAZQ16635 292 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 DCAF6Q58WW2 860 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ZC3H12AQ5D1E8 599 aaKnown RBP8.71□□□□□ -1.02
GTF3A-206ENST00000470606 EFHC1Q5JVL4 640 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ZNF280DQ6N043 979 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 SPOCD1Q6ZMY3 1216 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 POLNQ7Z5Q5 900 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 SCD5Q86SK9 330 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 CMTR2Q8IYT2 770 aaKnown RBP8.71□□□□□ -1.02
GTF3A-206ENST00000470606 SIX6OS1Q8N1H7 587 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 CCDC185Q8N715 623 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ADAM32Q8TC27 787 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 AUTS2Q8WXX7 1259 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 EDEM1Q92611 657 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 OSBPL8Q9BZF1 889 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 NMUR1Q9HB89 426 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 CNGB3Q9NQW8 809 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ASNSD1Q9NWL6 643 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 OSER1Q9NX31 292 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 MTRRQ9UBK8 725 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 RAB21Q9UL25 225 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 ZMYND8Q9ULU4 1186 aaPredicted RBP8.71□□□□□ -1.02
GTF3A-206ENST00000470606 CDY1Q9Y6F8 540 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 EYSQ5T1H1 3165 aa8.71□□□□□ -1.02
GTF3A-206ENST00000470606 hCG_1818297A0A087WSY0 165 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ESYT3A0FGR9 886 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 LRRD1A4D1F6 860 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 OR6C75A6NL08 312 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ZBBXA8MT70 800 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 DAB1O75553 588 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 KRT1P04264 644 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 KDELR1P24390 212 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 GRIK1P39086 918 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 KCNJ1P48048 391 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 CLCN6P51797 869 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SLC8A3P57103 927 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ROR1Q01973 937 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ELAVL2Q12926 359 aaKnown RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 MTMR3Q13615 1198 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 CYP1B1Q16678 543 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SLC25A52Q3SY17 297 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SEL1L2Q5TEA6 688 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SLC8B1Q6J4K2 584 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 C4orf50Q6ZRC1 276 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SCN4BQ8IWT1 228 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 FBXO22Q8NEZ5 403 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 UBE2Q2Q8WVN8 375 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 C1orf54Q8WWF1 131 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 RIN2Q8WYP3 895 aaPredicted RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 PIK3R5Q8WYR1 880 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 FUBP3Q96I24 572 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 YME1L1Q96TA2 773 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SNRNP25Q9BV90 132 aaKnown RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 DNAI2Q9GZS0 605 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms