RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 IMPG2Q9BZV3 1241 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 NACA2Q9H009 215 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 ARHGEF4Q9NR80 690 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 RXFP3Q9NSD7 469 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 GMIPQ9P107 970 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 CACNA1BQ00975 2339 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 MYO18AQ92614 2054 aaKnown RBP18.51■□□□□ 0.55
COL7A1-208ENST00000470076 THADAQ6YHU6 1953 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 FAM237AA0A1B0GTK4 181 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 BCLAF3A2AJT9 711 aaKnown RBP18.5■□□□□ 0.55
COL7A1-208ENST00000470076 ALDH1A2O94788 518 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 RHOBTB3O94955 611 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 HLA-DRAP01903 254 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 TNFRSF4P43489 277 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 VAMP7P51809 220 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 CREB5Q02930 508 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 NFIL3Q16649 462 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 PREPLQ4J6C6 727 aaPredicted RBP18.5■□□□□ 0.55
COL7A1-208ENST00000470076 C1orf220Q5T0J3 134 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 STPG1Q5TH74 334 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 INTS8Q75QN2 995 aaKnown RBP18.5■□□□□ 0.55
COL7A1-208ENST00000470076 C12orf40Q86WS4 652 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 ALLCQ8N6M5 410 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 IL17RCQ8NAC3 791 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 CNTNAP3BQ96NU0 1288 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 CNTNAP3Q9BZ76 1288 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 TLR8Q9NR97 1041 aaKnown RBP18.5■□□□□ 0.55
COL7A1-208ENST00000470076 HMGXB4Q9UGU5 601 aa18.5■□□□□ 0.55
COL7A1-208ENST00000470076 ANTXRLA6NF34 631 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 TM4SF5O14894 197 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 HOXC11O43248 304 aaPredicted RBP18.49■□□□□ 0.55
COL7A1-208ENST00000470076 TLR5O60602 858 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 BEST1O76090 585 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 CAVIN2O95810 425 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 FAM200BP0CF97 657 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 NR2F2P24468 414 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 TIE1P35590 1138 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 KIR2DL1P43626 348 aaPredicted RBP18.49■□□□□ 0.55
COL7A1-208ENST00000470076 NDUFA8P51970 172 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 ENPEPQ07075 957 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 INCA1Q0VD86 236 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 MESP2Q0VG99 397 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 ORC1Q13415 861 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 EOGTQ5NDL2 527 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 BTBD8Q5XKL5 378 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 PMS2CLQ68D20 193 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 SPOPLQ6IQ16 392 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 C12orf29Q8N999 325 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 TXNDC5Q8NBS9 432 aaKnown RBP18.49■□□□□ 0.55
COL7A1-208ENST00000470076 MDGA1Q8NFP4 955 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 SMOC1Q9H4F8 434 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 CYP3A43Q9HB55 503 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 POLMQ9NP87 494 aaPredicted RBP18.49■□□□□ 0.55
COL7A1-208ENST00000470076 FAM49BQ9NUQ9 324 aa18.49■□□□□ 0.55
COL7A1-208ENST00000470076 KLF8O95600 359 aaPredicted RBP18.48■□□□□ 0.55
COL7A1-208ENST00000470076 CHRM1P11229 460 aaPredicted RBP18.48■□□□□ 0.55
COL7A1-208ENST00000470076 RPL13P26373 211 aaKnown RBP18.48■□□□□ 0.55
COL7A1-208ENST00000470076 KDSRQ06136 332 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 DPYDQ12882 1025 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 TMEM92Q6UXU6 159 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 NUDT18Q6ZVK8 323 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 SFTPA1Q8IWL2 248 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 BBS7Q8IWZ6 715 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 ETFBKMTQ8IXQ9 262 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 PHTF2Q8N3S3 785 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 GUF1Q8N442 669 aaKnown RBP18.48■□□□□ 0.55
COL7A1-208ENST00000470076 OLIG1Q8TAK6 271 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 KCNV2Q8TDN2 545 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 HNRNPABQ99729 332 aaKnown RBP18.48■□□□□ 0.55
COL7A1-208ENST00000470076 NT5C1AQ9BXI3 368 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 DNAI2Q9GZS0 605 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 SPHK2Q9NRA0 654 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 DEC1Q9P2X7 70 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 INVSQ9Y283 1065 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 ZDHHC9Q9Y397 364 aa18.48■□□□□ 0.55
COL7A1-208ENST00000470076 SGK1O00141 431 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 PRR29P0C7W0 189 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 IRF1P10914 325 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 KRT13P13646 458 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 ADORA2BP29275 332 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 GCLMP48507 274 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 EMC10Q5UCC4 262 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 RNF43Q68DV7 783 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 TCEAL6Q6IPX3 200 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 CLEC20AQ6ZU45 233 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 HTR3DQ70Z44 454 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 TTC30AQ86WT1 665 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 FAM186BQ8IYM0 893 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 TAS1R2Q8TE23 839 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 WHAMMQ8TF30 809 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 TCEAL3Q969E4 200 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 CYFIP2Q96F07 1278 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 NIF3L1Q9GZT8 377 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 SCAND2PQ9GZW5 306 aaPredicted RBP18.47■□□□□ 0.55
COL7A1-208ENST00000470076 PNPLA8Q9NP80 782 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 CYLDQ9NQC7 956 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 SCML2Q9UQR0 700 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 ATP6V1DQ9Y5K8 247 aa18.47■□□□□ 0.55
COL7A1-208ENST00000470076 A0A1W2PQ27 194 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms